Lineage for d2b8pa1 (2b8p A:2-129)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2949054Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2951070Superfamily d.58.6: Nucleoside diphosphate kinase, NDK [54919] (2 families) (S)
  5. 2951071Family d.58.6.1: Nucleoside diphosphate kinase, NDK [54920] (2 proteins)
  6. 2951072Protein Nucleoside diphosphate kinase, NDK [54921] (23 species)
  7. 2951192Species Mimivirus [TaxId:315393] [143286] (2 PDB entries)
    Uniprot Q5UQL3 2-137
  8. 2951199Domain d2b8pa1: 2b8p A:2-129 [128101]
    Other proteins in same PDB: d2b8pa2, d2b8pb2
    complexed with so4

Details for d2b8pa1

PDB Entry: 2b8p (more details), 2.55 Å

PDB Description: Crystal structure of Acanthamoeba polyphaga mimivirus NDK, the first viral nucleoside diphosphate kinase
PDB Compounds: (A:) Probable nucleoside diphosphate kinase

SCOPe Domain Sequences for d2b8pa1:

Sequence, based on SEQRES records: (download)

>d2b8pa1 d.58.6.1 (A:2-129) Nucleoside diphosphate kinase, NDK {Mimivirus [TaxId: 315393]}
qrtlvlikpdaferslvaeimgriekknfkivsmkfwskaprnlieqhykehseqsyfnd
ncdfmvsgpiisivyegtdaiskirrlqgniltpgtirgdlandirenlihasdsedsav
deisiwfp

Sequence, based on observed residues (ATOM records): (download)

>d2b8pa1 d.58.6.1 (A:2-129) Nucleoside diphosphate kinase, NDK {Mimivirus [TaxId: 315393]}
qrtlvlikpdaferslvaeimgriekknfkivsmkfwskaprnlieqhykeyfndncdfm
vsgpiisivyegtdaiskirrlqgniltpgtirgdlandirenlihasdsedsavdeisi
wfp

SCOPe Domain Coordinates for d2b8pa1:

Click to download the PDB-style file with coordinates for d2b8pa1.
(The format of our PDB-style files is described here.)

Timeline for d2b8pa1:

2951199
d2b8pa1 in context of chain
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Domains from same chain:
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d2b8pa2