Lineage for d2b2ca1 (2b2c A:3-314)
- Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds) 
Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the restSuperfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (61 families) 
Family c.66.1.17: Spermidine synthase [69557] (3 proteins)
contains additional N-terminal tetramerisation all-beta domain, res. 1-71Protein Spermidine synthase [69558] (6 species)
polyamine aminopropyltransferase
Species Nematode (Caenorhabditis elegans) [TaxId:6239] [142589] (1 PDB entry)
Uniprot Q9U2F0 3-314
Domain d2b2ca1: 2b2c A:3-314 [127706]
Other proteins in same PDB: d2b2cb_
Details for d2b2ca1
PDB Entry: 2b2c (more details), 2.5 Å
PDB Description: cloning, expression, characterisation and three- dimensional structure determination of the caenorhabditis elegans spermidine synthase
PDB Compounds: (A:) spermidine synthaseSCOPe Domain Sequences for d2b2ca1:
Sequence, based on SEQRES records: (download)
>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
klhkgwftefspddlekmngasdeeptkvlksdgqemggawpgqafslqvkkvlfheksk
yqdvlvfesttygnvlvldgivqaterdefsyqemlahlpmfahpdpkrvliigggdggi
lrevlkhesvekvtmceidemvidvakkflpgmscgfshpkldlfcgdgfeflknhknef
dviitdssdpvgpaeslfgqsyyellrdalkedgilssqgesvwlhlpliahlvafnrki
fpavtyaqsivstypsgsmgylicaknanrdvttpartltaeqikalnlrfynsevhkaa
fvlpqfvknale
Sequence, based on observed residues (ATOM records): (download)
>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
klhkgwftefspddlgawpgqafslqvkkvlfhekskyqdvlvfesttygnvlvldgivq
aterdefsyqemlahlpmfahpdpkrvliigggdggilrevlkhesvekvtmceidemvi
dvakkflpgmscgfshpkldlfcgdgfeflknhknefdviitdssyyellrdalkedgil
ssqgesvwlhlpliahlvafnrkifpavtyaqsivstypsgsmgylicaknanrdvttpa
rtltaeqikalnlrfynsevhkaafvlpqfvknale
SCOPe Domain Coordinates for d2b2ca1:
Click to download the PDB-style file with coordinates for d2b2ca1.
(The format of our PDB-style files is described here.)
(The format of our PDB-style files is described here.)
Timeline for d2b2ca1:
- d2b2ca1 first appeared in SCOP 1.73
- d2b2ca1 appears in SCOPe 2.07
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