Lineage for d1zcca1 (1zcc A:1-240)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2839880Superfamily c.1.18: PLC-like phosphodiesterases [51695] (4 families) (S)
  5. 2839940Family c.1.18.3: Glycerophosphoryl diester phosphodiesterase [89508] (5 proteins)
    Pfam PF03009
  6. 2839949Protein Glycerophosphodiester phosphodiesterase UgpQ [141866] (1 species)
  7. 2839950Species Agrobacterium tumefaciens [TaxId:358] [141867] (1 PDB entry)
    Uniprot Q8U887 1-240
  8. 2839951Domain d1zcca1: 1zcc A:1-240 [124903]
    Other proteins in same PDB: d1zccb_, d1zccc_, d1zccd_, d1zcce_, d1zccf_
    complexed with act, so4

Details for d1zcca1

PDB Entry: 1zcc (more details), 2.5 Å

PDB Description: crystal structure of glycerophosphodiester phosphodiesterase from agrobacterium tumefaciens str.c58
PDB Compounds: (A:) glycerophosphodiester phosphodiesterase

SCOPe Domain Sequences for d1zcca1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1zcca1 c.1.18.3 (A:1-240) Glycerophosphodiester phosphodiesterase UgpQ {Agrobacterium tumefaciens [TaxId: 358]}
mtkivshrganrfapentfaaadlalqqgadyieldvresadgvlyvihdetldrttngt
gpvghmlsseidtldaggwfddrfkgaivprldaylehlrgragvyielkycdpakvaal
vrhlgmvrdtfyfsfseemrqglqsiapefrrmmtldiakspslvgavhhasiieitpaq
mrrpgiieasrkagleimvyyggddmavhreiatsdvdyinldrpdlfaavrsgmaelll

SCOPe Domain Coordinates for d1zcca1:

Click to download the PDB-style file with coordinates for d1zcca1.
(The format of our PDB-style files is described here.)

Timeline for d1zcca1: