Lineage for d1zba1_ (1zba 1:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2821496Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2821778Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2821779Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 proteins)
    the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
    there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)
  6. 2822070Protein automated matches [190854] (27 species)
    not a true protein
  7. 2822168Species Foot-and-mouth disease virus [TaxId:12110] [188180] (9 PDB entries)
  8. 2822169Domain d1zba1_: 1zba 1: [162437]
    automated match to d1qqp1_

Details for d1zba1_

PDB Entry: 1zba (more details), 2 Å

PDB Description: foot-and-mouth disease virus serotype a1061 complexed with oligosaccharide receptor.
PDB Compounds: (1:) coat protein vp1

SCOPe Domain Sequences for d1zba1_:

Sequence, based on SEQRES records: (download)

>d1zba1_ b.121.4.1 (1:) automated matches {Foot-and-mouth disease virus [TaxId: 12110]}
ttttgesadpvtttvenyggdtqvqrrhhtdvgfimdrfvkinslspthvidlmqthkhg
ivgallraatyyfsdleivvrhdgnltwvpngapeaalsntsnptaynkapftrlalpyt
aphrvlatvydgtnkysasdsrsgdlgsiaarvatqlpasfnygaiqaqaihellvrmkr
aelycprpllaikvtsqdrykqkiiapa

Sequence, based on observed residues (ATOM records): (download)

>d1zba1_ b.121.4.1 (1:) automated matches {Foot-and-mouth disease virus [TaxId: 12110]}
ttttgesadpvtttvenyggdtqvqrrhhtdvgfimdrfvkinslspthvidlmqthkhg
ivgallraatyyfsdleivvrhdgnltwvpngapeaalsntsnptaynkapftrlalpyt
aphrvlatvydgtnkystqlpasfnygaiqaqaihellvrmkraelycprpllaikvtsq
drykqkiiapa

SCOPe Domain Coordinates for d1zba1_:

Click to download the PDB-style file with coordinates for d1zba1_.
(The format of our PDB-style files is described here.)

Timeline for d1zba1_:

View in 3D
Domains from other chains:
(mouse over for more information)
d1zba3_