Lineage for d1wd8a1 (1wd8 A:113-293)

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
    sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
  4. Superfamily b.2.9: Peptidylarginine deiminase Pad4, middle domain [110083] (2 families) (S)
    automatically mapped to Pfam PF08527
  5. Family b.2.9.1: Peptidylarginine deiminase Pad4, middle domain [110084] (1 protein)
  6. Protein Peptidylarginine deiminase Pad4, middle domain [110085] (1 species)
  7. Species Human (Homo sapiens) [TaxId:9606] [110086] (17 PDB entries)
    Uniprot Q9UM07
  8. Domain d1wd8a1: 1wd8 A:113-293 [109237]
    Other proteins in same PDB: d1wd8a2, d1wd8a3

Details for d1wd8a1

PDB Entry: 1wd8 (more details), 2.8 Å

PDB Description: Calcium free form of human peptidylarginine deiminase type4 (PAD4)
PDB Compounds: (A:) Protein-arginine deiminase type IV

SCOPe Domain Sequences for d1wd8a1:

Sequence, based on SEQRES records: (download)

>d1wd8a1 b.2.9.1 (A:113-293) Peptidylarginine deiminase Pad4, middle domain {Human (Homo sapiens) [TaxId: 9606]}
veislcaditrtgkvkptravkdqrtwtwgpcgqgaillvncdrdnlessamdceddevl
dsedlqdmslmtlstktpkdfftnhtlvlhvarsemdkvrvfqatrgklsskcsvvlgpk
wpshylmvpggkhnmdfyvealafpdtdfpglitltislldtsnlelpeavvfqdsvvfr
v

Sequence, based on observed residues (ATOM records): (download)

>d1wd8a1 b.2.9.1 (A:113-293) Peptidylarginine deiminase Pad4, middle domain {Human (Homo sapiens) [TaxId: 9606]}
veislcaditrtgkvkqrtwtwgpcgqgaillvncdrdldsedlqdmslmtlstktpkdf
ftnhtlvlhvarsemdkvrvfqatrkcsvvlgpkwpshylmvpggkhnmdfyvealafpd
tdfpglitltislldtsnlelpeavvfqdsvvfrv

SCOPe Domain Coordinates for d1wd8a1 are not available.

Timeline for d1wd8a1:

View in 3D
Domains from same chain:
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d1wd8a2, d1wd8a3