Lineage for d1w5da1 (1w5d A:5-462)

  1. Root: SCOP 1.75
  2. 883176Class e: Multi-domain proteins (alpha and beta) [56572] (66 folds)
  3. 883341Fold e.3: beta-lactamase/transpeptidase-like [56600] (1 superfamily)
    contains a cluster of helices and an alpha+beta sandwich
  4. 883342Superfamily e.3.1: beta-lactamase/transpeptidase-like [56601] (3 families) (S)
  5. 883798Family e.3.1.3: Dac-like [144040] (3 proteins)
    Pfam PF02113; D-Ala-D-Ala carboxypeptidase 3 (S13) family; contains a large insertion comprising two subdomains: (d1) aplha+beta with topological similarity to one subunit of the DTD-like family ((69501)) and (d2) six-stranded beta-sandwich with a crossed-loop topology
  6. 883821Protein Penicillin-binding protein DacC [144041] (1 species)
  7. 883822Species Bacillus subtilis [TaxId:1423] [144042] (2 PDB entries)
    Uniprot P39844 34-491
  8. 883823Domain d1w5da1: 1w5d A:5-462 [120642]
    complexed with ca

Details for d1w5da1

PDB Entry: 1w5d (more details), 2.1 Å

PDB Description: crystal structure of pbp4a from bacillus subtilis
PDB Compounds: (A:) penicillin-binding protein

SCOP Domain Sequences for d1w5da1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1w5da1 e.3.1.3 (A:5-462) Penicillin-binding protein DacC {Bacillus subtilis [TaxId: 1423]}
dalsgqidkiladhpalegamagitvrsaetgavlyehsgdtrmrpasslklltaaaals
vlgenysfttevrtdgtlkgkklngnlylkgkgdptllpsdfdkmaeilkhsgvkvikgn
ligddtwhddmrlspdmpwsdeytyygapisaltaspnedydagtvivevtpnqkegeep
avsvspktdyitikndakttaagsekdltierehgtntitiegsvpvdanktkewisvwe
pagyaldlfkqslkkqgitvkgdiktgeapsssdvllshrsmplsklfvpfmklsnngha
evlvkemgkvkkgegswekglevlnstlpefgvdskslvlrdgsgishidavssdqlsql
lydiqdqswfsaylnslpvagnpdrmvggtlrnrmkgtpaqgkvraktgslstvsslsgy
aetksgkklvfsillnglideedgkdiedqiavilanq

SCOP Domain Coordinates for d1w5da1:

Click to download the PDB-style file with coordinates for d1w5da1.
(The format of our PDB-style files is described here.)

Timeline for d1w5da1: