Lineage for d1upgb_ (1upg B:)
- Root: SCOPe 2.02
Class a: All alpha proteins [46456] (284 folds) 
Fold a.2: Long alpha-hairpin [46556] (20 superfamilies)
2 helices; antiparallel hairpin, left-handed twist
Superfamily a.2.13: Transcriptional repressor TraM [109631] (1 family) 
similar structure to L29p (46561); contains extra short helix; forms homodimer: an open bundleFamily a.2.13.1: Transcriptional repressor TraM [109632] (2 proteins) Protein Transcriptional repressor TraM [109633] (1 species) Species Agrobacterium tumefaciens [TaxId:358] [109634] (3 PDB entries)
Uniprot Q57471
Domain d1upgb_: 1upg B: [107993]
Details for d1upgb_
PDB Entry: 1upg (more details), 1.8 Å
PDB Description: crystal structure of the quorum-sensing protein tram from agrobacterium tumefaciens
PDB Compounds: (B:) transcriptional repressor tramSCOPe Domain Sequences for d1upgb_:
Sequence; same for both SEQRES and ATOM records: (download)
>d1upgb_ a.2.13.1 (B:) Transcriptional repressor TraM {Agrobacterium tumefaciens [TaxId: 358]}
meledanvtkkvelrpligltrglpptdletitidairthrrlvekadelfqalpetykt
gqacggpqhiryieasiemhaqmsalntlysilgfipkvv
SCOPe Domain Coordinates for d1upgb_:
Click to download the PDB-style file with coordinates for d1upgb_.
(The format of our PDB-style files is described here.)
(The format of our PDB-style files is described here.)
Timeline for d1upgb_:
- d1upgb_ first appeared in SCOP 1.69
- d1upgb_ appears in SCOPe 2.01
- d1upgb_ appears in SCOPe 2.03
- d1upgb_ appears in the current release, SCOPe 2.08
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