Lineage for d1uaja_ (1uaj A:)

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1884654Fold c.116: alpha/beta knot [75216] (1 superfamily)
    core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot
  4. 1884655Superfamily c.116.1: alpha/beta knot [75217] (9 families) (S)
    known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
    all known members have dimeric structures
  5. 1884718Family c.116.1.4: tRNA(m1G37)-methyltransferase TrmD [89629] (2 proteins)
    fold and dimerisation mode are similar to those of the YbeA-like family; contains additional C-terminal all-alpha subdomain
  6. 1884719Protein tRNA(m1G37)-methyltransferase TrmD [89630] (3 species)
  7. 1884726Species Haemophilus influenzae [TaxId:727] [89631] (4 PDB entries)
  8. 1884728Domain d1uaja_: 1uaj A: [88381]

Details for d1uaja_

PDB Entry: 1uaj (more details), 1.85 Å

PDB Description: Crystal structure of tRNA(m1G37)methyltransferase: Insight into tRNA recognition
PDB Compounds: (A:) tRNA (guanine-N(1)-)-methyltransferase

SCOPe Domain Sequences for d1uaja_:

Sequence, based on SEQRES records: (download)

>d1uaja_ c.116.1.4 (A:) tRNA(m1G37)-methyltransferase TrmD {Haemophilus influenzae [TaxId: 727]}
glvprgshmwigvislfpemfkaitefgvtgravkhnllkvecwnprdftfdkhktvddr
pygggpgmlmmvqplrdaihtakaaagegakviylspqgrkldqggvtelaqnqklilvc
gryegiderliqteideewsigdyvltggelpamtlidavarfipgvlgkqasaeedsfa
dglldcphytrpevlegltvppvlmsghheeirkwrlkqslqrtwlrrpelleglaltde
qrkllkeaqaehns

Sequence, based on observed residues (ATOM records): (download)

>d1uaja_ c.116.1.4 (A:) tRNA(m1G37)-methyltransferase TrmD {Haemophilus influenzae [TaxId: 727]}
glvprgshmwigvislfpemfkaitefgvtgravkhnllkvecwnprdftfdkhktvddr
pygggpgmlmmvqplrdaihtakaaagegakviylspqgrkldqggvtelaqnqklilvc
gryegiderliqteideewsigdyvltggelpamtlidavarfipgvlglldcphytrpe
vlegltvppvlmsghheeirkwrlkqslqrtwlrrpelleglaltdeqrkllkeaqaehn
s

SCOPe Domain Coordinates for d1uaja_:

Click to download the PDB-style file with coordinates for d1uaja_.
(The format of our PDB-style files is described here.)

Timeline for d1uaja_: