Lineage for d1tr9a_ (1tr9 A:)

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1815292Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 1818156Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 1820068Family c.1.8.7: NagZ-like [51553] (4 proteins)
    Pfam PF00933; Glycosyl hydrolase family 3 domain
    Some members have reversed beta strand compared to other members of fold
  6. 1820100Protein Beta-hexosaminidase NagZ [117370] (1 species)
  7. 1820101Species Vibrio cholerae [TaxId:666] [117371] (3 PDB entries)
    Uniprot Q9KU37
  8. 1820103Domain d1tr9a_: 1tr9 A: [112617]

Details for d1tr9a_

PDB Entry: 1tr9 (more details), 1.8 Å

PDB Description: structure of beta-hexosaminidase from vibrio cholerae
PDB Compounds: (A:) Beta-hexosaminidase

SCOPe Domain Sequences for d1tr9a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]}
slgplwldvagyelsaedreilqhptvggvilfgrnyhdnqqllalnkairqaakrpili
gvdqeggrvqrfregfsrippaqyyaraengvelaeqggwlmaaeliahdvdlsfapvld
mgfackaignrafgedvqtvlkhssaflrgmkavgmattgkhfpghgaviadshletpyd
eretiaqdmaifraqieagvldammpahvvyphydaqpasgssywlkqvlreelgfkgiv
fsddlsmegaavmggpvershqalvagcdmilicnkreaavevldnlpimevpqaeallk
kqqfsyselkrlerwqqasanmqrlieqfs

SCOPe Domain Coordinates for d1tr9a_:

Click to download the PDB-style file with coordinates for d1tr9a_.
(The format of our PDB-style files is described here.)

Timeline for d1tr9a_: