Lineage for d1pgja1 (1pgj A:179-478)

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2721323Fold a.100: 6-phosphogluconate dehydrogenase C-terminal domain-like [48178] (1 superfamily)
    multihelical; common core is formed around two long antiparallel helices related by (pseudo) twofold symmetry
  4. 2721324Superfamily a.100.1: 6-phosphogluconate dehydrogenase C-terminal domain-like [48179] (13 families) (S)
    N-terminal domain is Rossmann-fold with a family-specific C-terminal extension
  5. 2721325Family a.100.1.1: Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain [48180] (3 proteins)
    Hydroxyisobutyrate dehydrogenase domain is similar to one structural repeat in the 6-phosphogluconate dehydrogenase domain
  6. 2721326Protein 6-phosphogluconate dehydrogenase (6PGD) [48181] (2 species)
    duplication; contains two structural repeats
  7. 2721333Species Trypanosome (Trypanosoma brucei) [TaxId:5691] [48183] (1 PDB entry)
  8. 2721334Domain d1pgja1: 1pgj A:179-478 [18783]
    Other proteins in same PDB: d1pgja2, d1pgjb2
    complexed with so4
    multiple common domains: applies to families that are inconsistently divided into domains

Details for d1pgja1

PDB Entry: 1pgj (more details), 2.82 Å

PDB Description: x-ray structure of 6-phosphogluconate dehydrogenase from the protozoan parasite t. brucei
PDB Compounds: (A:) 6-phosphogluconate dehydrogenase

SCOPe Domain Sequences for d1pgja1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1pgja1 a.100.1.1 (A:179-478) 6-phosphogluconate dehydrogenase (6PGD) {Trypanosome (Trypanosoma brucei) [TaxId: 5691]}
gagscvkmyhnsgeyailqiwgevfdilramglnndevaavledwksknflksymldisi
aaarakdkdgsyltehvmdrigskgtglwsaqealeigvpapslnmavvsrqftmykter
qanasnapgitqspgytlknkspsgpeikqlydsvciaiiscyaqmfqclremdkvhnfg
lnlpatiatfragcilqgyllkpmteafeknpnisnlmcafqteiraglqnyrdmvalit
sklevsipvlsaslnyvtamftptlkygqlvslqrdvfgrhgyervdkdgresfqwpelq

SCOPe Domain Coordinates for d1pgja1:

Click to download the PDB-style file with coordinates for d1pgja1.
(The format of our PDB-style files is described here.)

Timeline for d1pgja1:

2721334
d1pgja1 in context of chain
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Domains from same chain:
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d1pgja2