Lineage for d1p3da3 (1p3d A:107-321)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2904325Fold c.72: Ribokinase-like [53612] (3 superfamilies)
    core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
    potential superfamily: members of this fold have similar functions but different ATP-binding sites
  4. 2904995Superfamily c.72.2: MurD-like peptide ligases, catalytic domain [53623] (3 families) (S)
    has extra strand located between strands 1 and 2
  5. 2904996Family c.72.2.1: MurCDEF [53624] (5 proteins)
    automatically mapped to Pfam PF08245
  6. 2905001Protein UDP-N-acetylmuramate-alanine ligase MurC [82520] (2 species)
  7. 2905002Species Haemophilus influenzae [TaxId:727] [89776] (4 PDB entries)
  8. 2905003Domain d1p3da3: 1p3d A:107-321 [87730]
    Other proteins in same PDB: d1p3da1, d1p3da2, d1p3db1, d1p3db2
    complexed with anp, mn, uma

Details for d1p3da3

PDB Entry: 1p3d (more details), 1.7 Å

PDB Description: Crystal Structure of UDP-N-acetylmuramic acid:L-alanine ligase (MurC) in Complex with UMA and ANP.
PDB Compounds: (A:) UDP-N-acetylmuramate--alanine ligase

SCOPe Domain Sequences for d1p3da3:

Sequence; same for both SEQRES and ATOM records: (download)

>d1p3da3 c.72.2.1 (A:107-321) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
raqmlaeimrfrhgiavagthgkttttamismiytqakldptfvngglvksagknahlga
sryliaeadesdasflhlqpmvsvvtnmepdhmdtyegdfekmkatyvkflhnlpfygla
vmcaddpvlmelvpkvgrqvitygfseqadyriedyeqtgfqghytvicpnnerinvlln
vpgkhnalnataalavakeegianeailealadfq

SCOPe Domain Coordinates for d1p3da3:

Click to download the PDB-style file with coordinates for d1p3da3.
(The format of our PDB-style files is described here.)

Timeline for d1p3da3: