Lineage for d1omia2 (1omi A:1138-1237)
- Root: SCOPe 2.04
Class a: All alpha proteins [46456] (285 folds) 
Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and downSuperfamily a.4.5: "Winged helix" DNA-binding domain [46785] (85 families) 
contains a small beta-sheet (wing)
Family a.4.5.4: CAP C-terminal domain-like [46796] (9 proteins) - Protein Listeriolysin regulatory protein PrfA, C-terminal domain [88975] (1 species)
- Species Listeria monocytogenes [TaxId:1639] [88976] (1 PDB entry)
Domain d1omia2: 1omi A:1138-1237 [87080]
Other proteins in same PDB: d1omia1, d1omib1
complexed with gol
Details for d1omia2
PDB Entry: 1omi (more details), 2.8 Å
PDB Description: crystal structure of prfa,the transcriptional regulator in listeria monocytogenes
PDB Compounds: (A:) listeriolysin regulatory proteinSCOPe Domain Sequences for d1omia2:
Sequence, based on SEQRES records: (download)
>d1omia2 a.4.5.4 (A:1138-1237) Listeriolysin regulatory protein PrfA, C-terminal domain {Listeria monocytogenes [TaxId: 1639]}
gklgsicgqlliltyvygketpdgikitldnltmqelgyssgiahssavsriisklkqek
vivyknscfyvqnldylkryapkldewfylacpatwgkln
Sequence, based on observed residues (ATOM records): (download)
>d1omia2 a.4.5.4 (A:1138-1237) Listeriolysin regulatory protein PrfA, C-terminal domain {Listeria monocytogenes [TaxId: 1639]}
gklgsicgqlliltyvygketpdgikitldnltmqelsavsriisklkqekvivyknscf
yvqnldylkryapkldewfylacpatwgkln
SCOPe Domain Coordinates for d1omia2:
Click to download the PDB-style file with coordinates for d1omia2.
(The format of our PDB-style files is described here.)
(The format of our PDB-style files is described here.)
Timeline for d1omia2:
- d1omia2 first appeared in SCOP 1.65
- d1omia2 appears in SCOPe 2.03
- d1omia2 appears in SCOPe 2.05
- d1omia2 appears in the current release, SCOPe 2.08
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