Lineage for d1oima_ (1oim A:)

  1. Root: SCOPe 2.06
  2. 2089713Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2089714Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2093018Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2094473Family c.1.8.4: Family 1 of glycosyl hydrolase [51521] (6 proteins)
  6. 2094483Protein Beta-glucosidase A [51528] (9 species)
  7. 2094528Species Thermotoga maritima [TaxId:2336] [89475] (8 PDB entries)
    Uniprot Q08638
  8. 2094533Domain d1oima_: 1oim A: [93065]
    Other proteins in same PDB: d1oimb2
    complexed with noj

Details for d1oima_

PDB Entry: 1oim (more details), 2.15 Å

PDB Description: family 1 b-glucosidase from thermotoga maritima
PDB Compounds: (A:) beta-glucosidase a

SCOPe Domain Sequences for d1oima_:

Sequence, based on SEQRES records: (download)

>d1oima_ c.1.8.4 (A:) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]}
vkkfpegflwgvatasyqiegspladgagmsiwhtfshtpgnvkngdtgdvacdhynrwk
edieiieklgvkayrfsiswprilpegtgrvnqkgldfynriidtllekgitpfvtiyhw
dlpfalqlkggwanreiadwfaeysrvlfenfgdrvknwitlnepwvvaivghlygvhap
gmrdiyvafravhnllraharavkvfretvkdgkigivfnngyfepasekeediravrfm
hqfnnyplflnpiyrgdypelvlefareylpenykddmseiqekidfvglnyysghlvkf
dpdapakvsfverdlpktamgweivpegiywilkkvkeeynppevyitengaafddvvse
dgrvhdqnridylkahigqawkaiqegvplkgyfvwslldnfewaegyskrfgivyvdys
tqkrivkdsgywysnvvknngled

Sequence, based on observed residues (ATOM records): (download)

>d1oima_ c.1.8.4 (A:) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]}
vkkfpegflwgvatasyqiegspladgagmsiwhtfshtpgnvkngdtgdvacdhynrwk
edieiieklgvkayrfsiswprilpegtgrvnqkgldfynriidtllekgitpfvtiyhw
dlpfalqlkggwanreiadwfaeysrvlfenfgdrvknwitlnepwvvaivghlygvhap
gmrdiyvafravhnllraharavkvfretvkdgkigivfnngyfepasekediravrfmh
qfnnyplflnpiyrgdypelvlefareylpenykddmseiqekidfvglnyysghlvkfd
pdapakvsfverdlpktamgweivpegiywilkkvkeeynppevyitengaafddvvsed
grvhdqnridylkahigqawkaiqegvplkgyfvwslldnfewaegyskrfgivyvdyst
qkrivkdsgywysnvvknngled

SCOPe Domain Coordinates for d1oima_:

Click to download the PDB-style file with coordinates for d1oima_.
(The format of our PDB-style files is described here.)

Timeline for d1oima_: