Lineage for d1nkga1 (1nkg A:251-337)

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.3: Prealbumin-like [49451] (8 superfamilies)
    sandwich; 7 strands in 2 sheets, greek-key
    variations: some members have additional 1-2 strands to common fold
  4. Superfamily b.3.1: Starch-binding domain-like [49452] (4 families) (S)
  5. Family b.3.1.2: Rhamnogalacturonase B, RhgB, middle domain [110091] (1 protein)
  6. Protein Rhamnogalacturonase B, RhgB, middle domain [110092] (1 species)
  7. Species Fungus (Aspergillus aculeatus) [TaxId:5053] [110093] (3 PDB entries)
    Uniprot Q00019
  8. Domain d1nkga1: 1nkg A:251-337 [103859]
    Other proteins in same PDB: d1nkga2, d1nkga3
    complexed with ca, so4

Details for d1nkga1

PDB Entry: 1nkg (more details), 1.5 Å

PDB Description: rhamnogalacturonan lyase from aspergillus aculeatus
PDB Compounds: (A:) Rhamnogalacturonase B

SCOPe Domain Sequences for d1nkga1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1nkga1 b.3.1.2 (A:251-337) Rhamnogalacturonase B, RhgB, middle domain {Fungus (Aspergillus aculeatus) [TaxId: 5053]}

SCOPe Domain Coordinates for d1nkga1 are not available.

Timeline for d1nkga1:

View in 3D
Domains from same chain:
(mouse over for more information)
d1nkga2, d1nkga3