Lineage for d1mnna_ (1mnn A:)

  1. Root: SCOPe 2.01
  2. 929298Class b: All beta proteins [48724] (174 folds)
  3. 938438Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (10 superfamilies)
    sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
  4. 938790Superfamily b.2.5: p53-like transcription factors [49417] (7 families) (S)
  5. 939045Family b.2.5.7: DNA-binding domain from NDT80 [81992] (1 protein)
  6. 939046Protein DNA-binding domain from NDT80 [81993] (1 species)
    common fold is decorated with many additional structures
  7. 939047Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [81994] (14 PDB entries)
  8. 939048Domain d1mnna_: 1mnn A: [79324]
    complex with DNA
    protein/DNA complex

Details for d1mnna_

PDB Entry: 1mnn (more details), 1.4 Å

PDB Description: Structure of the sporulation specific transcription factor Ndt80 bound to DNA
PDB Compounds: (A:) NDT80 protein

SCOPe Domain Sequences for d1mnna_:

Sequence, based on SEQRES records: (download)

>d1mnna_ b.2.5.7 (A:) DNA-binding domain from NDT80 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
viltqlnedgttsnyfdkrklkiaprstlqfkvgppfelvrdycpvveshtgrtldlrii
pridrgfdhideewvgykrnyftlvstfetancdldtflkssfdllvedssvegrlrvqy
faikikaknddddteinlvqhtakrdkgpqfcpsvcplvpsplpkhqtireasnvrnitk
mkkydstfylhrdhvnyeeygvdsllfsypedsiqkvaryervqfassisvkkpsqqnkh
fslhvilgavvdpdtfhgenpgipydelalkngskgmfvylqemktppliirgrspsnya
ssq

Sequence, based on observed residues (ATOM records): (download)

>d1mnna_ b.2.5.7 (A:) DNA-binding domain from NDT80 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
viltqlnedgttsnyfdkrklkiaprstlqfkvgppfelvrdycpvveshtgrtldlrii
pridrgfdhideewvgykrnyftlvstfetancdldtflkssfdllvgrlrvqyfaikik
aknddddteinlvqhtakrdkgpqfcpsvcplvpsplpkhqtireasnvrnitkmkkyds
tfylhrdhvnyeeygvdsllfsypedsiqkvaryervqfassisvkkpsqqnkhfslhvi
lgavvdpdgipydelalkngskgmfvylqemktppliirgrspsnyassq

SCOPe Domain Coordinates for d1mnna_:

Click to download the PDB-style file with coordinates for d1mnna_.
(The format of our PDB-style files is described here.)

Timeline for d1mnna_: