Lineage for d1lm6a_ (1lm6 A:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3000942Fold d.167: Peptide deformylase [56419] (1 superfamily)
    alpha-beta(5)-alpha; 3 layers: a/b/a; meander beta-sheet wraps around the C-terminal alpha-helix
  4. 3000943Superfamily d.167.1: Peptide deformylase [56420] (2 families) (S)
    nickel-dependent enzyme
  5. 3000944Family d.167.1.1: Peptide deformylase [56421] (2 proteins)
    automatically mapped to Pfam PF01327
  6. 3000945Protein Peptide deformylase [56422] (11 species)
  7. 3001031Species Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [90057] (10 PDB entries)
  8. 3001040Domain d1lm6a_: 1lm6 A: [84628]
    complexed with fe, gol

Details for d1lm6a_

PDB Entry: 1lm6 (more details), 1.75 Å

PDB Description: Crystal Structure of Peptide Deformylase from Streptococcus pneumoniae
PDB Compounds: (A:) peptide deformylase DEFB

SCOPe Domain Sequences for d1lm6a_:

Sequence, based on SEQRES records: (download)

>d1lm6a_ d.167.1.1 (A:) Peptide deformylase {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
msaieritkaahlidmndiiregnptlrtvaeevtfplsdqeiilgekmmqflkhsqdpv
maekmglrggvglaapqldiskriiavlvpniveegetpqeaydleaimynpkivshsvq
daalgegegclsvdrnvpgyvvrharvtvdyfdkdgekhriklkgynsivvqheidhing
imfydrinekdpfavkdgllil

Sequence, based on observed residues (ATOM records): (download)

>d1lm6a_ d.167.1.1 (A:) Peptide deformylase {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
msaieritkaahlidmndiiregnptlrtvaeevtfplsdqeiilgekmmqflkhsqdpv
maekmglrggvglaapqldiskriiavlvpnydleaimynpkivshsvqdaalgegegcl
svdrnvpgyvvrharvtvdyfdkdgekhriklkgynsivvqheidhingimfydrinekd
pfavkdgllil

SCOPe Domain Coordinates for d1lm6a_:

Click to download the PDB-style file with coordinates for d1lm6a_.
(The format of our PDB-style files is described here.)

Timeline for d1lm6a_: