Lineage for d1g16b_ (1g16 B:)

  1. Root: SCOPe 2.04
  2. 1565955Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1593542Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 1593543Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (25 families) (S)
    division into families based on beta-sheet topologies
  5. 1594390Family c.37.1.8: G proteins [52592] (79 proteins)
    core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest
  6. 1594908Protein Rab-related protein Sec4 [52607] (1 species)
  7. 1594909Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [52608] (3 PDB entries)
  8. 1594911Domain d1g16b_: 1g16 B: [32023]
    complexed with co, gdp

Details for d1g16b_

PDB Entry: 1g16 (more details), 1.8 Å

PDB Description: crystal structure of sec4-gdp
PDB Compounds: (B:) Ras-related protein SEC4

SCOPe Domain Sequences for d1g16b_:

Sequence, based on SEQRES records: (download)

>d1g16b_ c.37.1.8 (B:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
simkilligdsgvgkscllvrfvedkfnpsfittigidfkiktvdingkkvklqiwdtag
qerfrtittayyrgamgiilvyditdertftnikqwfktvnehandeaqlllvgnksdme
trvvtadqgealakelgipfiessaknddnvneifftlakliqekids

Sequence, based on observed residues (ATOM records): (download)

>d1g16b_ c.37.1.8 (B:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
simkilligdsgvgkscllvrfvedkfnpidfkiktvdingkkvklqiwdtagqerfrti
ttayyrgamgiilvyditdertftnikqwfktvnehandeaqlllvgnksdmetrvvtad
qgealakelgipfiessaknddnvneifftlakliqekids

SCOPe Domain Coordinates for d1g16b_:

Click to download the PDB-style file with coordinates for d1g16b_.
(The format of our PDB-style files is described here.)

Timeline for d1g16b_: