Lineage for d1fa2a_ (1fa2 A:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2829818Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2829819Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 2830026Protein beta-Amylase [51481] (3 species)
    Common fold covers whole protein structure
  7. 2830054Species Sweet potato (Ipomoea batatas) [TaxId:4120] [51484] (3 PDB entries)
  8. 2830056Domain d1fa2a_: 1fa2 A: [28797]
    complexed with dtt
    has additional insertions and/or extensions that are not grouped together

Details for d1fa2a_

PDB Entry: 1fa2 (more details), 2.3 Å

PDB Description: crystal structure of beta-amylase from sweet potato
PDB Compounds: (A:) beta-amylase

SCOPe Domain Sequences for d1fa2a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]}
apipgvmpignyvslyvmlplgvvnadnvfpdkekvedelkqvkaggcdgvmvdvwwgii
eakgpkqydwsayrelfqlvkkcglkiqaimsfhqcggnvgdavfipipqwilqigdknp
difytnragnrnqeylslgvdnqrlfqgrtalemyrdfmesfrdnmadflkagdivdiev
gcgaagelrypsypetqgwvfpgigefqcydkymvadwkeavkqagnadwempgkgagty
ndtpdkteffrpngtyktdmgkffltwysnkliihgdqvleeankvfvglrvniaakvsg
ihwwynhvshaaeltagfynvagrdgyrpiarmlarhhatlnftclemrdseqpaeaksa
pqelvqqvlssgwkeyidvagenalprydataynqmllklrpngvnlngppklkmsglty
lrlsddllqtdnfelfkkfvkkmhadldpspnaispavlersnsaitidelmeatkgsrp
fpwydvtdmpvdgsnpfd

SCOPe Domain Coordinates for d1fa2a_:

Click to download the PDB-style file with coordinates for d1fa2a_.
(The format of our PDB-style files is described here.)

Timeline for d1fa2a_: