Lineage for d1ckqa_ (1ckq A:)

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1856505Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
    core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
  4. 1856506Superfamily c.52.1: Restriction endonuclease-like [52980] (35 families) (S)
  5. 1856507Family c.52.1.1: Restriction endonuclease EcoRI [52981] (2 proteins)
    automatically mapped to Pfam PF02963
  6. 1856508Protein Restriction endonuclease EcoRI [52982] (1 species)
  7. 1856509Species Escherichia coli [TaxId:562] [52983] (7 PDB entries)
  8. 1856510Domain d1ckqa_: 1ckq A: [33229]
    protein/DNA complex

Details for d1ckqa_

PDB Entry: 1ckq (more details), 1.85 Å

PDB Description: pre-transition state eco ri endonuclease/cognate dna (tcgcgaattcgcg) complex
PDB Compounds: (A:) protein (endonuclease)

SCOPe Domain Sequences for d1ckqa_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ckqa_ c.52.1.1 (A:) Restriction endonuclease EcoRI {Escherichia coli [TaxId: 562]}
sqgvigifgdyakahdlavgevsklvkkalsneypqlsfryrdsikkteinealkkidpd
lggtlfvsnssikpdggivevkddygewrvvlvaeakhqgkdiinirngllvgkrgdqdl
maagnaiershkniseianfmlseshfpyvlflegsnfltenisitrpdgrvvnleynsg
ilnrldrltaanygmpinsnlcinkfvnhkdksimlqaasiytqgdgrewdskimfeimf
disttslrvlgrdlfeqltsk

SCOPe Domain Coordinates for d1ckqa_:

Click to download the PDB-style file with coordinates for d1ckqa_.
(The format of our PDB-style files is described here.)

Timeline for d1ckqa_: