Lineage for d1bdba_ (1bdb A:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2841004Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2841005Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2841375Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (73 proteins)
    also known as short-chain dehydrogenases and SDR family
    parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7
    has additional subdomain(s) that are not in the common domain
  6. 2841745Protein Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase [51780] (1 species)
  7. 2841746Species Pseudomonas sp., lb400 [TaxId:306] [51781] (1 PDB entry)
  8. 2841747Domain d1bdba_: 1bdb A: [29874]
    complexed with nad

Details for d1bdba_

PDB Entry: 1bdb (more details), 2 Å

PDB Description: cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase from pseudomonas sp. lb400
PDB Compounds: (A:) cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase

SCOPe Domain Sequences for d1bdba_:

Sequence, based on SEQRES records: (download)

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}
mklkgeavlitggasglgralvdrfvaegakvavldksaerlaeletdhgdnvlgivgdv
rsledqkqaasrcvarfgkidtlipnagiwdystalvdlpeesldaafdevfhinvkgyi
havkaclpalvasrgnviftisnagfypngggplytaakhaivglvrelafelapyvrvn
gvgsgginsdlrgpsslgmgskaistvpladmlksvlpigrmpeveeytgayvffatrgd
aapatgallnydgglgvrgffsgaggndlleqlnih

Sequence, based on observed residues (ATOM records): (download)

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}
mklkgeavlitggasglgralvdrfvaegakvavldksaerlaeletdhgdnvlgivgdv
rsledqkqaasrcvarfgkidtlipnagiwdystalvdlpeesldaafdevfhinvkgyi
havkaclpalvasrgnviftisnagfypngggplytaakhaivglvrelafelapyvrvn
gvgsgginsdlrgpsslgpladmlksvlpigrmpeveeytgayvffatrgdaapatgall
nydgglgvrgffsgaggndlleqlnih

SCOPe Domain Coordinates for d1bdba_:

Click to download the PDB-style file with coordinates for d1bdba_.
(The format of our PDB-style files is described here.)

Timeline for d1bdba_: