Lineage for d1j8fa_ (1j8f A:)

  1. Root: SCOP 1.75
  2. 814173Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 828384Fold c.31: DHS-like NAD/FAD-binding domain [52466] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456; Rossmann-like
  4. 828385Superfamily c.31.1: DHS-like NAD/FAD-binding domain [52467] (6 families) (S)
    binds cofactor molecules in the opposite direction than classical Rossmann fold
  5. 828587Family c.31.1.5: Sir2 family of transcriptional regulators [63984] (7 proteins)
    silent information regulator 2; contains insertion of a rubredoxin-like zinc finger domain
  6. 828643Protein Sirt2 histone deacetylase [63987] (1 species)
  7. 828644Species Human (Homo sapiens) [TaxId:9606] [63988] (1 PDB entry)
  8. 828645Domain d1j8fa_: 1j8f A: [62738]

Details for d1j8fa_

PDB Entry: 1j8f (more details), 1.7 Å

PDB Description: human sirt2 histone deacetylase
PDB Compounds: (A:) sirtuin 2, isoform 1

SCOP Domain Sequences for d1j8fa_:

Sequence, based on SEQRES records: (download)

>d1j8fa_ c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Homo sapiens) [TaxId: 9606]}
geadmdflrnlfsqtlslgsqkerlldeltlegvarymqsercrrviclvgagistsagi
pdfrspstglydnlekyhlpypeaifeisyfkkhpepffalakelypgqfkptichyfmr
llkdkglllrcytqnidtleriagleqedlveahgtfytshcvsascrheyplswmkeki
fsevtpkcedcqslvkpdivffgeslparffscmqsdflkvdlllvmgtslqvqpfasli
skaplstprllinkekagqsdpflgmimglgggmdfdskkayrdvawlgecdqgclalae
llgwkkeledlvrrehasidaqs

Sequence, based on observed residues (ATOM records): (download)

>d1j8fa_ c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Homo sapiens) [TaxId: 9606]}
geadmdflrnlfrlldeltlegvarymqsercrrviclvgagistsagipdfrspstgly
dnlekyhlpypeaifeisyfkkhpepffalakelypgqfkptichyfmrllkdkglllrc
ytqnidtleriagleqedlveahgtfytshcvsascrheyplswmkekifsevtpkcedc
qslvkpdivffgeslparffscmqsdflkvdlllvmgtslqvqpfasliskaplstprll
inkekagqsdpflgmimglgggmdfdskkayrdvawlgecdqgclalaellgwkkeledl
vrrehasidaqs

SCOP Domain Coordinates for d1j8fa_:

Click to download the PDB-style file with coordinates for d1j8fa_.
(The format of our PDB-style files is described here.)

Timeline for d1j8fa_: