Lineage for Fold a.60: SAM domain-like

  1. Root: SCOPe 2.05
  2. 1715731Class a: All alpha proteins [46456] (286 folds)
  3. 1737577Fold a.60: SAM domain-like [47768] (16 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins

Superfamilies:

  1. 1737578a.60.1: SAM/Pointed domain [47769] (4 families) (S)
  2. 1737768a.60.2: RuvA domain 2-like [47781] (7 families) (S)
    duplication: contains two helix-hairpin-helix (HhH) motifs
  3. 1737867a.60.3: C-terminal domain of RNA polymerase alpha subunit [47789] (1 family) (S)
    contains one classic and one pseudo HhH motifs
  4. 1737895a.60.4: Rad51 N-terminal domain-like [47794] (4 families) (S)
    contains one classic and one pseudo HhH motifs
  5. 1737950a.60.5: Barrier-to-autointegration factor, BAF [47798] (1 family) (S)
    contains one classic and one pseudo HhH motifs
    automatically mapped to Pfam PF02961
  6. 1737967a.60.6: DNA polymerase beta, N-terminal domain-like [47802] (2 families) (S)
    contains one classic and one pseudo HhH motifs
  7. 1738231a.60.7: 5' to 3' exonuclease, C-terminal subdomain [47807] (2 families) (S)
  8. 1738281a.60.8: HRDC-like [47819] (5 families) (S)
  9. 1738330a.60.9: lambda integrase-like, N-terminal domain [47823] (2 families) (S)
  10. 1738406a.60.10: Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain [47831] (1 family) (S)
  11. 1738422a.60.11: Hypothetical protein YjbJ [69047] (2 families) (S)
    automatically mapped to Pfam PF05532
  12. 1738431a.60.12: PsbU/PolX domain-like [81585] (3 families) (S)
    contains one classic and one pseudo HhH motifs
  13. 1738721a.60.13: Putative methyltransferase TM0872, insert domain [81799] (1 family) (S)
  14. 1738732a.60.14: eIF2alpha middle domain-like [116742] (2 families) (S)
  15. 1738751a.60.15: YozE-like [140652] (1 family) (S)
  16. 1738760a.60.16: GspK insert domain-like [158544] (1 family) (S)
    tandem repeat of two SAM-like domains iserted into pilin fold; domain 1 contains one classic HhH motif

More info for Fold a.60: SAM domain-like

Timeline for Fold a.60: SAM domain-like: