PDB entry 9icp

View 9icp on RCSB PDB site
Description: DNA polymerase beta (pol b) (e.c.2.7.7.7) complexed with six base pairs of DNA; soaked in the presence of pyrophosphate (1 millimolar) and mgcl2 (5 millimolar)
Class: transferase/DNA
Keywords: DNA-directed DNA polymerase, DNA replication, DNA repair, nucleotidyltransferase, complex (nucleotidyltransferase/DNA
Deposited on 1995-12-16, released 1996-11-15
The last revision prior to the SCOP 1.73 freeze date was dated 2003-04-01, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.165
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (DNA polymerase beta (e.c.2.7.7.7))
    Species: SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d9icpa1, d9icpa3, d9icpa4
  • Chain 'P':
    Compound: DNA (5'-d(*cp*ap*gp*ap*tp*g)-3')
  • Chain 'T':
    Compound: DNA (5'-d(*cp*ap*tp*cp*tp*gp*t)-3')
  • Heterogens: NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >9icpA (A:)
mskrkapqetlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeak
klpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegik
tledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgs
frrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcq
lpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirp
lgvtgvageplpvdsekdifdyiqwkyrepkdrse

    Sequence, based on observed residues (ATOM records): (download) 
    >9icpA (A:)
etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtk
iaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrkn
edklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaess
gdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndek
eyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvag
eplpvdsekdifdyiqwkyrepkdrse

  • Chain 'P':
    No sequence available.

  • Chain 'T':
    No sequence available.