PDB entry 9icm

View 9icm on RCSB PDB site
Description: DNA polymerase beta (pol b) (e.c.2.7.7.7) complexed with six base pairs of double stranded DNA (no 5'-phosphate)
Class: transferase/DNA
Keywords: DNA-directed DNA polymerase, DNA replication, DNA repair, nucleotidyltransferase, complex (nucleotidyltransferase/DNA
Deposited on 1995-12-16, released 1996-11-15
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.155
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (DNA polymerase beta (e.c.2.7.7.7))
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d9icma1, d9icma3, d9icma4
  • Chain 'P':
    Compound: DNA (5'-d(*cp*ap*gp*ap*tp*g)-3')
  • Chain 'T':
    Compound: DNA (5'-d(*cp*ap*tp*cp*tp*gp*t)-3')
  • Heterogens: NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >9icmA (A:)
    mskrkapqetlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeak
    klpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegik
    tledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgs
    frrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcq
    lpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirp
    lgvtgvageplpvdsekdifdyiqwkyrepkdrse
    

    Sequence, based on observed residues (ATOM records): (download)
    >9icmA (A:)
    etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtk
    iaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrkn
    edklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaess
    gdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndek
    eyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvag
    eplpvdsekdifdyiqwkyrepkdrse
    

  • Chain 'P':
    No sequence available.

  • Chain 'T':
    No sequence available.