PDB entry 8ohm

View 8ohm on RCSB PDB site
Description: crystal structure of RNA helicase from genotype 1b hepatitis c virus: mechanism of unwinding duplex RNA
Class: helicase
Keywords: RNA helicase, hepatitis c virus, hcv, unwinding mechanism, helicase
Deposited on 1998-03-13, released 1999-04-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-04-04, with a file datestamp of 2018-03-29.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: RNA helicase
    Species: Hepatitis C virus [TaxId:11103]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P26663 (0-434)
      • conflict (6)
      • conflict (50)
      • conflict (68)
      • conflict (73)
      • conflict (75)
      • conflict (109)
      • conflict (168)
      • conflict (193)
      • conflict (196)
      • conflict (213)
      • conflict (257)
      • conflict (394)
      • conflict (396)
      • conflict (415)
      • conflict (425)
      • conflict (428)
    Domains in SCOPe 2.08: d8ohma1, d8ohma2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >8ohmA (A:)
ppavpqtfqvahlhaptgsgkstkvpaayaaqgykvlvlnpsvaatlgfgvymskahgid
pnirtgvraittggpitystygkfladggcsggaydiiicdechstdstsilgigtvldq
aetagarlvvlatatppgsvtvphpnieevalsntgeipfygkaipievirggrhlifch
skkkcdelaaklsalglnavayyrgldvsviptsgdvvvvatdalmtgytgdfdsvidcn
tcvtqtvdfsldptftidtttvpqdavsrsqrrgrtgrgrrgiyrfvtpgerpsgmfdss
vlcecydagcawyeltpaetsvrlraylntpglpvcqdhlefwesvftglthidahflsq
tkqagdnfpylvayqatvcaraqapppswdqmwksltrlkptlhgptpllyrlgalqnev
tlthpvtkfimacms