PDB entry 8icv

View 8icv on RCSB PDB site
Description: DNA polymerase beta (pol b) (e.c.2.7.7.7) complexed with seven base pairs of DNA; soaked in the presence of dgtp (1 millimolar) and mncl2 (5 millimolar)
Class: transferase/DNA
Keywords: DNA-directed DNA polymerase, DNA replication, DNA repair, nucleotidyltransferase, complex (nucleotidyltransferase/DNA
Deposited on 1996-01-04, released 1996-11-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 3.2 Å
R-factor: 0.159
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (DNA polymerase beta (e.c.2.7.7.7))
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d8icva1, d8icva3, d8icva4
  • Chain 'P':
    Compound: DNA (5'-d(*tp*cp*tp*ap*ap*tp*gp*g)-3')
  • Chain 'T':
    Compound: DNA (5'-d(*cp*ap*tp*tp*ap*gp*ap*a)-3')
  • Heterogens: MN, NA, DGT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >8icvA (A:)
mskrkapqetlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeak
klpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegik
tledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgs
frrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcq
lpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirp
lgvtgvageplpvdsekdifdyiqwkyrepkdrse

    Sequence, based on observed residues (ATOM records): (download) 
    >8icvA (A:)
etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtk
iaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrkn
edklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaess
gdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndek
eyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvag
eplpvdsekdifdyiqwkyrepkdrse

  • Chain 'P':
    No sequence available.

  • Chain 'T':
    No sequence available.