PDB entry 7tl0

View 7tl0 on RCSB PDB site
Description: Cryo-EM structure of hMPV preF bound by Fabs MPE8 and SAN32-2
Class: viral protein/immune system
Keywords: neutralizing antibody, fusion protein, metapneumovirus, site 0, VIRAL PROTEIN-IMMUNE SYSTEM complex
Deposited on 2022-01-17, released 2022-09-14
The last revision prior to the SCOPe 2.08 freeze date was dated 2022-09-14, with a file datestamp of 2022-09-09.
Experiment type: EM
Resolution: 3.06 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fusion glycoprotein F0
    Species: Human metapneumovirus [TaxId:162145]
    Database cross-references and differences (RAF-indexed):
    • Uniprot H6X1Z0 (0-489)
      • engineered mutation (99-100)
      • engineered mutation (109)
      • engineered mutation (126)
      • engineered mutation (139)
      • engineered mutation (146)
      • engineered mutation (152)
      • engineered mutation (184)
      • engineered mutation (218)
      • engineered mutation (230)
      • engineered mutation (321)
      • engineered mutation (364)
      • engineered mutation (452)
      • engineered mutation (462)
      • expression tag (490-550)
  • Chain 'B':
    Compound: Fusion glycoprotein F0
    Species: Human metapneumovirus [TaxId:162145]
    Database cross-references and differences (RAF-indexed):
    • Uniprot H6X1Z0 (0-489)
      • engineered mutation (99-100)
      • engineered mutation (109)
      • engineered mutation (126)
      • engineered mutation (139)
      • engineered mutation (146)
      • engineered mutation (152)
      • engineered mutation (184)
      • engineered mutation (218)
      • engineered mutation (230)
      • engineered mutation (321)
      • engineered mutation (364)
      • engineered mutation (452)
      • engineered mutation (462)
      • expression tag (490-550)
  • Chain 'C':
    Compound: Fusion glycoprotein F0
    Species: Human metapneumovirus [TaxId:162145]
    Database cross-references and differences (RAF-indexed):
    • Uniprot H6X1Z0 (0-489)
      • engineered mutation (99-100)
      • engineered mutation (109)
      • engineered mutation (126)
      • engineered mutation (139)
      • engineered mutation (146)
      • engineered mutation (152)
      • engineered mutation (184)
      • engineered mutation (218)
      • engineered mutation (230)
      • engineered mutation (321)
      • engineered mutation (364)
      • engineered mutation (452)
      • engineered mutation (462)
      • expression tag (490-550)
  • Chain 'D':
    Compound: SAN32-2 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7TL0 (0-223)
    Domains in SCOPe 2.08: d7tl0d_
  • Chain 'E':
    Compound: SAN32-2 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7TL0 (0-213)
    Domains in SCOPe 2.08: d7tl0e_
  • Chain 'F':
    Compound: SAN32-2 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7TL0 (0-223)
    Domains in SCOPe 2.08: d7tl0f_
  • Chain 'G':
    Compound: SAN32-2 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7TL0 (0-213)
    Domains in SCOPe 2.08: d7tl0g_
  • Chain 'H':
    Compound: SAN32-2 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7TL0 (0-223)
    Domains in SCOPe 2.08: d7tl0h_
  • Chain 'I':
    Compound: SAN32-2 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7TL0 (0-213)
    Domains in SCOPe 2.08: d7tl0i_
  • Chain 'J':
    Compound: MPE8 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7TL0 (0-227)
    Domains in SCOPe 2.08: d7tl0j_
  • Chain 'K':
    Compound: MPE8 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7TL0 (0-215)
    Domains in SCOPe 2.08: d7tl0k_
  • Chain 'L':
    Compound: MPE8 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7TL0 (0-227)
    Domains in SCOPe 2.08: d7tl0l_
  • Chain 'M':
    Compound: MPE8 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7TL0 (0-215)
    Domains in SCOPe 2.08: d7tl0m_
  • Chain 'N':
    Compound: MPE8 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7TL0 (0-227)
    Domains in SCOPe 2.08: d7tl0n_
  • Chain 'O':
    Compound: MPE8 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7TL0 (0-215)
    Domains in SCOPe 2.08: d7tl0o_
  • Heterogens: NAG

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >7tl0D (D:)
    evqlvqsgaevkkpgeslrisckssgytfttywitwvrqmpgkglewmgridpsdsytdy
    spsfkghvtisvdksintaylqwgslkssdtaifycarqassgkiyfdywgqgtlvtvss
    astkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqss
    glyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscd
    

    Sequence, based on observed residues (ATOM records): (download)
    >7tl0D (D:)
    evqlvqsgaevkkpgeslrisckssgytfttywitwvrqmpgkglewmgridpsdsytdy
    spsfkghvtisvdksintaylqwgslkssdtaifycarqassgkiyfdywgqgtlvtvss
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >7tl0E (E:)
    diqmtqspsslsasvgdrvtitcqasqginyylnwyqqkpgkapkvliydasdletgvps
    rfsgggsgthftftisslqtedigtyycqqydnlpftfgqgtrleikrtvaapsvfifpp
    sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
    lskadyekhkvyacevthqglsspvtksfnrgec
    

    Sequence, based on observed residues (ATOM records): (download)
    >7tl0E (E:)
    diqmtqspsslsasvgdrvtitcqasqginyylnwyqqkpgkapkvliydasdletgvps
    rfsgggsgthftftisslqtedigtyycqqydnlpftfgqgtrle
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >7tl0F (F:)
    evqlvqsgaevkkpgeslrisckssgytfttywitwvrqmpgkglewmgridpsdsytdy
    spsfkghvtisvdksintaylqwgslkssdtaifycarqassgkiyfdywgqgtlvtvss
    astkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqss
    glyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscd
    

    Sequence, based on observed residues (ATOM records): (download)
    >7tl0F (F:)
    evqlvqsgaevkkpgeslrisckssgytfttywitwvrqmpgkglewmgridpsdsytdy
    spsfkghvtisvdksintaylqwgslkssdtaifycarqassgkiyfdywgqgtlvtvss
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >7tl0G (G:)
    diqmtqspsslsasvgdrvtitcqasqginyylnwyqqkpgkapkvliydasdletgvps
    rfsgggsgthftftisslqtedigtyycqqydnlpftfgqgtrleikrtvaapsvfifpp
    sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
    lskadyekhkvyacevthqglsspvtksfnrgec
    

    Sequence, based on observed residues (ATOM records): (download)
    >7tl0G (G:)
    diqmtqspsslsasvgdrvtitcqasqginyylnwyqqkpgkapkvliydasdletgvps
    rfsgggsgthftftisslqtedigtyycqqydnlpftfgqgtrle
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >7tl0H (H:)
    evqlvqsgaevkkpgeslrisckssgytfttywitwvrqmpgkglewmgridpsdsytdy
    spsfkghvtisvdksintaylqwgslkssdtaifycarqassgkiyfdywgqgtlvtvss
    astkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqss
    glyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscd
    

    Sequence, based on observed residues (ATOM records): (download)
    >7tl0H (H:)
    evqlvqsgaevkkpgeslrisckssgytfttywitwvrqmpgkglewmgridpsdsytdy
    spsfkghvtisvdksintaylqwgslkssdtaifycarqassgkiyfdywgqgtlvtvss
    

  • Chain 'I':
    Sequence, based on SEQRES records: (download)
    >7tl0I (I:)
    diqmtqspsslsasvgdrvtitcqasqginyylnwyqqkpgkapkvliydasdletgvps
    rfsgggsgthftftisslqtedigtyycqqydnlpftfgqgtrleikrtvaapsvfifpp
    sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
    lskadyekhkvyacevthqglsspvtksfnrgec
    

    Sequence, based on observed residues (ATOM records): (download)
    >7tl0I (I:)
    diqmtqspsslsasvgdrvtitcqasqginyylnwyqqkpgkapkvliydasdletgvps
    rfsgggsgthftftisslqtedigtyycqqydnlpftfgqgtrle
    

  • Chain 'J':
    Sequence, based on SEQRES records: (download)
    >7tl0J (J:)
    evqlvesggglvkpggslrlscaasgftfssysmnwvrqapgkglewvssisasssysdy
    adsakgrftisrdnaktslflqmnslraedtaiyfcararatgyssitpyfdiwgqgtlv
    tvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpav
    lqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscd
    

    Sequence, based on observed residues (ATOM records): (download)
    >7tl0J (J:)
    evqlvesggglvkpggslrlscaasgftfssysmnwvrqapgkglewvssisasssysdy
    adsakgrftisrdnaktslflqmnslraedtaiyfcararatgyssitpyfdiwgqgtlv
    tvss
    

  • Chain 'K':
    Sequence, based on SEQRES records: (download)
    >7tl0K (K:)
    qsvvtqppsvsgapgqrvtisctgsssnigagydvhwyqqlpgtapklliydnnnrpsgv
    pdrfsasksgtsaslaitglqaedeadyycqsydrslsgvfgtgtkvtvlgqpkaapsvt
    lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
    ylsltpeqwkshksyscqvthegstvektvaptecs
    

    Sequence, based on observed residues (ATOM records): (download)
    >7tl0K (K:)
    vvtqppsvsgapgqrvtisctgsssnigagydvhwyqqlpgtapklliydnnnrpsgvpd
    rfsasksgtsaslaitglqaedeadyycqsydrslsgvfgtgtkvtv
    

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >7tl0L (L:)
    evqlvesggglvkpggslrlscaasgftfssysmnwvrqapgkglewvssisasssysdy
    adsakgrftisrdnaktslflqmnslraedtaiyfcararatgyssitpyfdiwgqgtlv
    tvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpav
    lqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscd
    

    Sequence, based on observed residues (ATOM records): (download)
    >7tl0L (L:)
    evqlvesggglvkpggslrlscaasgftfssysmnwvrqapgkglewvssisasssysdy
    adsakgrftisrdnaktslflqmnslraedtaiyfcararatgyssitpyfdiwgqgtlv
    tvss
    

  • Chain 'M':
    Sequence, based on SEQRES records: (download)
    >7tl0M (M:)
    qsvvtqppsvsgapgqrvtisctgsssnigagydvhwyqqlpgtapklliydnnnrpsgv
    pdrfsasksgtsaslaitglqaedeadyycqsydrslsgvfgtgtkvtvlgqpkaapsvt
    lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
    ylsltpeqwkshksyscqvthegstvektvaptecs
    

    Sequence, based on observed residues (ATOM records): (download)
    >7tl0M (M:)
    vvtqppsvsgapgqrvtisctgsssnigagydvhwyqqlpgtapklliydnnnrpsgvpd
    rfsasksgtsaslaitglqaedeadyycqsydrslsgvfgtgtkvtv
    

  • Chain 'N':
    Sequence, based on SEQRES records: (download)
    >7tl0N (N:)
    evqlvesggglvkpggslrlscaasgftfssysmnwvrqapgkglewvssisasssysdy
    adsakgrftisrdnaktslflqmnslraedtaiyfcararatgyssitpyfdiwgqgtlv
    tvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpav
    lqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscd
    

    Sequence, based on observed residues (ATOM records): (download)
    >7tl0N (N:)
    evqlvesggglvkpggslrlscaasgftfssysmnwvrqapgkglewvssisasssysdy
    adsakgrftisrdnaktslflqmnslraedtaiyfcararatgyssitpyfdiwgqgtlv
    tvss
    

  • Chain 'O':
    Sequence, based on SEQRES records: (download)
    >7tl0O (O:)
    qsvvtqppsvsgapgqrvtisctgsssnigagydvhwyqqlpgtapklliydnnnrpsgv
    pdrfsasksgtsaslaitglqaedeadyycqsydrslsgvfgtgtkvtvlgqpkaapsvt
    lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
    ylsltpeqwkshksyscqvthegstvektvaptecs
    

    Sequence, based on observed residues (ATOM records): (download)
    >7tl0O (O:)
    vvtqppsvsgapgqrvtisctgsssnigagydvhwyqqlpgtapklliydnnnrpsgvpd
    rfsasksgtsaslaitglqaedeadyycqsydrslsgvfgtgtkvtv