PDB entry 7qd1

View 7qd1 on RCSB PDB site
Description: Structure of the orange carotenoid protein from Planktothrix agardhii binding echinenone in the P21 space group
Class: photosynthesis
Keywords: carotenoid-binding, photoprotection, carotenoid binding protein, photosynthesis
Deposited on 2021-11-26, released 2022-07-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2022-07-06, with a file datestamp of 2022-07-01.
Experiment type: XRAY
Resolution: 1.71 Å
R-factor: N/A
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Orange carotenoid-binding protein
    Species: Planktothrix agardhii [TaxId:1160]
    Gene: PLAM_2315
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7qd1a1, d7qd1a2
  • Chain 'C':
    Compound: Orange carotenoid-binding protein
    Species: Planktothrix agardhii [TaxId:1160]
    Gene: PLAM_2315
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7qd1c1, d7qd1c2
  • Heterogens: ECH, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >7qd1A (A:)
msftvdsargifpntltadvvpatiarfnqlnaedqlaliwfaylemgktitvaalgaan
mqfaeitmnqirqmsfqeqtqvmcdlanrtdtpisraygswtaniklgfwyqlgewmaqg
ivapipsgyklsanaasvlqaiqglesgqqitvlrncvvdmgfdtskldssqrvsepvvv
prdmaqrtqvtiegidnptvlnymnnmnandfevlielftpdgalqppfqkpivgkdavl
rffreecqnlklipergvtepadggytqikvtgkvqtpwfgagvgmnmawrfllspenki
ffvaidllaspkellnlvr

    Sequence, based on observed residues (ATOM records): (download) 
    >7qd1A (A:)
sftvdsargifpntltadvvpatiarfnqlnaedqlaliwfaylemgktitvaalgaanm
qfaeitmnqirqmsfqeqtqvmcdlanrtdtpisraygswtaniklgfwyqlgewmaqgi
vapipsgyklsanaasvlqaiqglesgqqitvlrncvvdmgfdtrvsepvvvprdmaqrt
qvtiegidnptvlnymnnmnandfevlielftpdgalqppfqkpivgkdavlrffreecq
nlklipergvtepadggytqikvtgkvqtpwfgagvgmnmawrfllspenkiffvaidll
aspkellnlvr

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >7qd1C (C:)
msftvdsargifpntltadvvpatiarfnqlnaedqlaliwfaylemgktitvaalgaan
mqfaeitmnqirqmsfqeqtqvmcdlanrtdtpisraygswtaniklgfwyqlgewmaqg
ivapipsgyklsanaasvlqaiqglesgqqitvlrncvvdmgfdtskldssqrvsepvvv
prdmaqrtqvtiegidnptvlnymnnmnandfevlielftpdgalqppfqkpivgkdavl
rffreecqnlklipergvtepadggytqikvtgkvqtpwfgagvgmnmawrfllspenki
ffvaidllaspkellnlvr

    Sequence, based on observed residues (ATOM records): (download) 
    >7qd1C (C:)
sftvdsargifpntltadvvpatiarfnqlnaedqlaliwfaylemgktitvaalgaanm
qfaeitmnqirqmsfqeqtqvmcdlanrtdtpisraygswtaniklgfwyqlgewmaqgi
vapipsgyklsanaasvlqaiqglesgqqitvlrncvvdmgfdrvsepvvvprdmaqrtq
vtiegidnptvlnymnnmnandfevlielftpdgalqppfqkpivgkdavlrffreecqn
lklipergvtepadggytqikvtgkvqtpwfgagvgmnmawrfllspenkiffvaidlla
spkellnlvr