PDB entry 7op2

View 7op2 on RCSB PDB site
Description: Chadox1/ Chimpanzee adenovirus Y25 fiber knob protein
Class: viral protein
Keywords: Fiber knob, VIRAL PROTEIN, adenovirus, fiber protein, spike, fiber, chimpanzee adenovirus, simian adenovirus, ChAdOx1, ChAd-Y25, Y25, Chimp Ad, ChAdV-Y25, cell binding, CAR
Deposited on 2021-05-28, released 2021-06-23
The last revision prior to the SCOPe 2.07 freeze date was dated 2021-06-23, with a file datestamp of 2021-06-18.
Experiment type: XRAY
Resolution: 1.59 Å
R-factor: N/A
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fiber
    Species: Chimpanzee adenovirus Y25 [TaxId:1123958]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7op2a_
  • Chain 'B':
    Compound: Fiber
    Species: Chimpanzee adenovirus Y25 [TaxId:1123958]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7op2b_
  • Chain 'C':
    Compound: Fiber
    Species: Chimpanzee adenovirus Y25 [TaxId:1123958]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7op2c_
  • Chain 'D':
    Compound: Fiber
    Species: Chimpanzee adenovirus Y25 [TaxId:1123958]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7op2d_
  • Chain 'E':
    Compound: Fiber
    Species: Chimpanzee adenovirus Y25 [TaxId:1123958]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7op2e_
  • Chain 'F':
    Compound: Fiber
    Species: Chimpanzee adenovirus Y25 [TaxId:1123958]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7op2f_
  • Chain 'G':
    Compound: Fiber
    Species: Chimpanzee adenovirus Y25 [TaxId:1123958]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7op2g_
  • Chain 'H':
    Compound: Fiber
    Species: Chimpanzee adenovirus Y25 [TaxId:1123958]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7op2h_
  • Chain 'I':
    Compound: Fiber
    Species: Chimpanzee adenovirus Y25 [TaxId:1123958]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7op2i_
  • Chain 'J':
    Compound: Fiber
    Species: Chimpanzee adenovirus Y25 [TaxId:1123958]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7op2j_
  • Chain 'K':
    Compound: Fiber
    Species: Chimpanzee adenovirus Y25 [TaxId:1123958]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7op2k_
  • Chain 'L':
    Compound: Fiber
    Species: Chimpanzee adenovirus Y25 [TaxId:1123958]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7op2l_
  • Heterogens: CA, EDO, TRS, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >7op2A (A:)
kltlwttpdpspncqllsdrdakftlcltkcgsqilgtvavaavtvgsalnpindtvksa
ivflrfdsdgvlmsnssmvgdywnfregqttqsvaytnavgfmpnlgaypktqsktpkns
ivsqvylngettmpmtltitfngtdekdttpvstysmtftwqwtgdykdknitfatnsft
fsymaqe

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >7op2B (B:)
kltlwttpdpspncqllsdrdakftlcltkcgsqilgtvavaavtvgsalnpindtvksa
ivflrfdsdgvlmsnssmvgdywnfregqttqsvaytnavgfmpnlgaypktqsktpkns
ivsqvylngettmpmtltitfngtdekdttpvstysmtftwqwtgdykdknitfatnsft
fsymaqe

    Sequence, based on observed residues (ATOM records): (download) 
    >7op2B (B:)
kltlwttpdpspncqllsdrdakftlcltkcgsqilgtvavaavtvgsalnpindtvksa
ivflrfdsdgvlmsnssmvgdywnfregqttqsvaytnavgfmpnlgaypktqsktpkns
ivsqvylngettmpmtltitfngtpvstysmtftwqwtgdykdknitfatnsftfsymaq
e

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >7op2C (C:)
kltlwttpdpspncqllsdrdakftlcltkcgsqilgtvavaavtvgsalnpindtvksa
ivflrfdsdgvlmsnssmvgdywnfregqttqsvaytnavgfmpnlgaypktqsktpkns
ivsqvylngettmpmtltitfngtdekdttpvstysmtftwqwtgdykdknitfatnsft
fsymaqe

    Sequence, based on observed residues (ATOM records): (download) 
    >7op2C (C:)
kltlwttpdpspncqllsdrdakftlcltkcgsqilgtvavaavtvgsalnpindtvksa
ivflrfdsdgvlmsnssmvgdywnfregqttqsvaytnavgfmpnlgaypktqsktpkns
ivsqvylngettmpmtltitfngtdetpvstysmtftwqwtgdykdknitfatnsftfsy
maqe

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >7op2D (D:)
kltlwttpdpspncqllsdrdakftlcltkcgsqilgtvavaavtvgsalnpindtvksa
ivflrfdsdgvlmsnssmvgdywnfregqttqsvaytnavgfmpnlgaypktqsktpkns
ivsqvylngettmpmtltitfngtdekdttpvstysmtftwqwtgdykdknitfatnsft
fsymaqe

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >7op2E (E:)
kltlwttpdpspncqllsdrdakftlcltkcgsqilgtvavaavtvgsalnpindtvksa
ivflrfdsdgvlmsnssmvgdywnfregqttqsvaytnavgfmpnlgaypktqsktpkns
ivsqvylngettmpmtltitfngtdekdttpvstysmtftwqwtgdykdknitfatnsft
fsymaqe

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >7op2F (F:)
kltlwttpdpspncqllsdrdakftlcltkcgsqilgtvavaavtvgsalnpindtvksa
ivflrfdsdgvlmsnssmvgdywnfregqttqsvaytnavgfmpnlgaypktqsktpkns
ivsqvylngettmpmtltitfngtdekdttpvstysmtftwqwtgdykdknitfatnsft
fsymaqe

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >7op2G (G:)
kltlwttpdpspncqllsdrdakftlcltkcgsqilgtvavaavtvgsalnpindtvksa
ivflrfdsdgvlmsnssmvgdywnfregqttqsvaytnavgfmpnlgaypktqsktpkns
ivsqvylngettmpmtltitfngtdekdttpvstysmtftwqwtgdykdknitfatnsft
fsymaqe

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >7op2H (H:)
kltlwttpdpspncqllsdrdakftlcltkcgsqilgtvavaavtvgsalnpindtvksa
ivflrfdsdgvlmsnssmvgdywnfregqttqsvaytnavgfmpnlgaypktqsktpkns
ivsqvylngettmpmtltitfngtdekdttpvstysmtftwqwtgdykdknitfatnsft
fsymaqe

    Sequence, based on observed residues (ATOM records): (download) 
    >7op2H (H:)
kltlwttpdpspncqllsdrdakftlcltkcgsqilgtvavaavtvgsalnpindtvksa
ivflrfdsdgvlmsnssmvgdywnfregqttqsvaytnavgfmpnlgaypktqsktpkns
ivsqvylngettmpmtltitfngtpvstysmtftwqwtgdykdknitfatnsftfsymaq
e

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >7op2I (I:)
kltlwttpdpspncqllsdrdakftlcltkcgsqilgtvavaavtvgsalnpindtvksa
ivflrfdsdgvlmsnssmvgdywnfregqttqsvaytnavgfmpnlgaypktqsktpkns
ivsqvylngettmpmtltitfngtdekdttpvstysmtftwqwtgdykdknitfatnsft
fsymaqe

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >7op2J (J:)
kltlwttpdpspncqllsdrdakftlcltkcgsqilgtvavaavtvgsalnpindtvksa
ivflrfdsdgvlmsnssmvgdywnfregqttqsvaytnavgfmpnlgaypktqsktpkns
ivsqvylngettmpmtltitfngtdekdttpvstysmtftwqwtgdykdknitfatnsft
fsymaqe

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >7op2K (K:)
kltlwttpdpspncqllsdrdakftlcltkcgsqilgtvavaavtvgsalnpindtvksa
ivflrfdsdgvlmsnssmvgdywnfregqttqsvaytnavgfmpnlgaypktqsktpkns
ivsqvylngettmpmtltitfngtdekdttpvstysmtftwqwtgdykdknitfatnsft
fsymaqe

    Sequence, based on observed residues (ATOM records): (download) 
    >7op2K (K:)
kltlwttpdpspncqllsdrdakftlcltkcgsqilgtvavaavtvgsalnpindtvksa
ivflrfdsdgvlmsnssmvgdywnfregqttqsvaytnavgfmpnlgaypktqsktpkns
ivsqvylngettmpmtltitfngttpvstysmtftwqwtgdykdknitfatnsftfsyma
qe

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >7op2L (L:)
kltlwttpdpspncqllsdrdakftlcltkcgsqilgtvavaavtvgsalnpindtvksa
ivflrfdsdgvlmsnssmvgdywnfregqttqsvaytnavgfmpnlgaypktqsktpkns
ivsqvylngettmpmtltitfngtdekdttpvstysmtftwqwtgdykdknitfatnsft
fsymaqe

    Sequence, based on observed residues (ATOM records): (download) 
    >7op2L (L:)
kltlwttpdpspncqllsdrdakftlcltkcgsqilgtvavaavtvgsalnpindtvksa
ivflrfdsdgvlmsnssmvgdywnfregqttqsvaytnavgfmpnlgaypktqsktpkns
ivsqvylngettmpmtltitfngvstysmtftwqwtgdykdknitfatnsftfsymaqe