PDB entry 7od6

View 7od6 on RCSB PDB site
Description: hepatitis b core protein + gsllgrmkga
Deposited on 2021-04-28, released 2021-05-26
The last revision was dated 2021-05-26, with a file datestamp of 2021-05-21.
Experiment type: EM
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: capsid protein
    Species: Hepatitis B virus genotype D subtype ayw (isolate France/Tiollais/1979) [TaxId:490133]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: capsid protein
    Species: Hepatitis B virus genotype D subtype ayw (isolate France/Tiollais/1979) [TaxId:490133]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: capsid protein
    Species: Hepatitis B virus genotype D subtype ayw (isolate France/Tiollais/1979) [TaxId:490133]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: capsid protein
    Species: Hepatitis B virus genotype D subtype ayw (isolate France/Tiollais/1979) [TaxId:490133]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Inhibitory Peptide P2 (GSLLGRMKGA)
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 7OD6 (0-End)
  • Chain 'F':
    Compound: Inhibitory Peptide P2 (GSLLGRMKGA)
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 7OD6 (0-End)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7od6A (A:)
mdidpykefgatvellsflpsdffpsvrdlldtasalyrealespehcsphhtalrqail
cwgelmtlatwvgvnledpasrdlvvsyvntnmglkfrqllwfhiscltfgretvieylv
sfgvwirtppayrppnapilstlpettvvrrrgrsprrrtpsprrrrsqsprrrrsqsre
sqc

    Sequence, based on observed residues (ATOM records):
    >7od6A (A:)
mdidpykefgatvellsflpsdffpsvrdlldtasalyrealespehcsphhtalrqail
cwgelmtlatwvgvnledpasrdlvvsyvntnmglkfrqllwfhiscltfgretvieylv
sfgvwirtppayrppnapilstl

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7od6B (B:)
mdidpykefgatvellsflpsdffpsvrdlldtasalyrealespehcsphhtalrqail
cwgelmtlatwvgvnledpasrdlvvsyvntnmglkfrqllwfhiscltfgretvieylv
sfgvwirtppayrppnapilstlpettvvrrrgrsprrrtpsprrrrsqsprrrrsqsre
sqc

    Sequence, based on observed residues (ATOM records):
    >7od6B (B:)
mdidpykefgatvellsflpsdffpsvrdlldtasalyrealespehcsphhtalrqail
cwgelmtlatwvgvnledpasrdlvvsyvntnmglkfrqllwfhiscltfgretvieylv
sfgvwirtppayrppnapilstlpettvvr

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7od6C (C:)
mdidpykefgatvellsflpsdffpsvrdlldtasalyrealespehcsphhtalrqail
cwgelmtlatwvgvnledpasrdlvvsyvntnmglkfrqllwfhiscltfgretvieylv
sfgvwirtppayrppnapilstlpettvvrrrgrsprrrtpsprrrrsqsprrrrsqsre
sqc

    Sequence, based on observed residues (ATOM records):
    >7od6C (C:)
mdidpykefgatvellsflpsdffpsvrdlldtasalyrealespehcsphhtalrqail
cwgelmtlatwvgvnledpasrdlvvsyvntnmglkfrqllwfhiscltfgretvieylv
sfgvwirtppayrppnapilstlp

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7od6D (D:)
mdidpykefgatvellsflpsdffpsvrdlldtasalyrealespehcsphhtalrqail
cwgelmtlatwvgvnledpasrdlvvsyvntnmglkfrqllwfhiscltfgretvieylv
sfgvwirtppayrppnapilstlpettvvrrrgrsprrrtpsprrrrsqsprrrrsqsre
sqc

    Sequence, based on observed residues (ATOM records):
    >7od6D (D:)
mdidpykefgatvellsflpsdffpsvrdlldtasalyrealespehcsphhtalrqail
cwgelmtlatwvgvnledpasrdlvvsyvntnmglkfrqllwfhiscltfgretvieylv
sfgvwirtppayrppnapilstlp

  • Chain 'E':
    Sequence, based on SEQRES records:
    >7od6E (E:)
xxxxxxgsllgrmkga

    Sequence, based on observed residues (ATOM records):
    >7od6E (E:)
xxxxxx

  • Chain 'F':
    Sequence, based on SEQRES records:
    >7od6F (F:)
xxxxxxgsllgrmkga

    Sequence, based on observed residues (ATOM records):
    >7od6F (F:)
xxxxxx