PDB entry 7o31

View 7o31 on RCSB PDB site
Description: crystal structure of the anti-pas fab 1.2 in complex with its epitope peptide and the anti-kappa vhh domain
Deposited on 2021-04-01, released 2021-07-07
The last revision was dated 2021-07-21, with a file datestamp of 2021-07-16.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: N/A
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: anti-PAS Fab 1.2 chimeric heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 7O31 (0-231)
  • Chain 'L':
    Compound: anti-PAS Fab 1.2 chimeric light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 7O31 (0-217)
  • Chain 'P':
    Compound: PAS#1 epitope peptide
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 7O31 (0-9)
  • Chain 'X':
    Compound: Anti-kappa VHH domain
    Species: LAMA GLAMA [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 7O31 (0-127)
  • Heterogens: EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'H':
    Sequence, based on SEQRES records:
    >7o31H (H:)
evqlvesggglvqpggslklscaasgftfssygmswvrqtpdkrlelvatinsnggstyy
ldsvkgrftisrdkakntlylqmsslksedtamyycvrggsiydgydyamdywgqgtsvt
vssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavl
qssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkschhhhhh

    Sequence, based on observed residues (ATOM records):
    >7o31H (H:)
evqlvesggglvqpggslklscaasgftfssygmswvrqtpdkrlelvatinsnggstyy
ldsvkgrftisrdkakntlylqmsslksedtamyycvrggsiydgydyamdywgqgtsvt
vssastkgpsvfplapsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgl
yslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepksc

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >7o31L (L:)
divltqspaslavslgqratiscrasqsvstssysymhwfqqkpgqppkllikyasnles
gvparfsgsgsgtdftlnihpveeedtatyycqhsweipltfgagtkleikrtvaapsvf
ifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysls
stltlskadyekhkvyacevthqglsspvtksfnrgec

  • Chain 'P':
    Sequence; same for both SEQRES and ATOM records:
    >7o31P (P:)
eapaspaapa

  • Chain 'X':
    Sequence, based on SEQRES records:
    >7o31X (X:)
mqvqlqesggglvqpggslrlscaasgrtisryamswfrqapgkerefvavarrsgdgaf
yadsvqgrftvsrddakntvylqmnslkpedtavyycaidsdtfysgsydywgqgtqvtv
sahhhhhh

    Sequence, based on observed residues (ATOM records):
    >7o31X (X:)
mqvqlqesggglvqpggslrlscaasgrtisryamswfrqapgkerefvavarrsgdgaf
yadsvqgrftvsrddakntvylqmnslkpedtavyycaidsdtfysgsydywgqgtqvtv
sahh