PDB entry 7nre

View 7nre on RCSB PDB site
Description: crystal structure of e.coli bama beta-barrel in complex with darobactin (crystal form 1)
Deposited on 2021-03-03, released 2021-04-21
The last revision was dated 2021-05-19, with a file datestamp of 2021-05-14.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Outer membrane protein assembly factor BamA
    Species: Escherichia coli O157:H7 [TaxId:83334]
    Gene: bamA, yaeT, Z0188, ECs0179
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A942 (Start-410)
      • conflict (300)
  • Chain 'C':
    Compound: Darobactin
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 7NRE (0-6)
  • Heterogens: UX8, C8E, MG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7nreA (A:)
    mgsshhhhhhssgenlyfqhmrntgsfnfgigygtesgvsfqagvqqdnwlgtgyavgin
    gtkndyqtyaelsvtnpyftvdgvslggrlfyndfqaddadlsdytnksygtdvtlgfpi
    neynslraglgyvhnslsnmqpqvamwrylysmgehpstsdqdnsfktddftfnygwtyn
    kldrgyfptdgsrvnltgkvtipgsdneyykvtldtatyvpidddhkwvvlgrtrwgygd
    glggkempfyenfyaggsstvrgfqsntigpkavyfphqasnydpdydyesatqdgakdl
    sksddavggnamavaslefitptpfisdkyansvrtsffwdmgtvwdtnwdssqysgypd
    ysdpsnirmsagialqwmsplgplvfsyaqpfkkydgdkaeqfqfnigktw
    

    Sequence, based on observed residues (ATOM records):
    >7nreA (A:)
    tgsfnfgigygtesgvsfqagvqqdnwlgtgyavgingtkndyqtyaelsvtnpyftvdg
    vslggrlfyndfqaddadlsdytnksygtdvtlgfpineynslraglgyvhnslsnmqpq
    vamwrylysmgehpstsdqdnsfktddftfnygwtynkldrgyfptdgsrvnltgkvtip
    gsdneyykvtldtatyvpidddhkwvvlgrtrwgygdglggkempfyenfyaggsstvrg
    fqsntigpkavyfphqdlsksddavggnamavaslefitptpfisdkyansvrtsffwdm
    gtvwdtnwdssqysgypdysdpsnirmsagialqwmsplgplvfsyaqpfkkydgdkaeq
    fqfnigktw
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >7nreC (C:)
    wnxsksf