PDB entry 7ndy

View 7ndy on RCSB PDB site
Description: Di-phosphorylated Barrier-to-Autointegration Factor (BAF) in complex with LEM domain of Emerin
Class: DNA binding protein
Keywords: Phosphorylation Complex High Resolution, DNA BINDING PROTEIN
Deposited on 2021-02-02, released 2021-04-07
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-04-28, with a file datestamp of 2021-04-23.
Experiment type: XRAY
Resolution: 1.44 Å
R-factor: N/A
AEROSPACI score: 0.6 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Barrier-to-autointegration factor, N-terminally processed
    Species: Homo sapiens [TaxId:9606]
    Gene: BANF1, BAF, BCRG1
    Database cross-references and differences (RAF-indexed):
    • Uniprot O75531 (1-88)
      • conflict (66)
      • conflict (76)
      • conflict (79)
      • conflict (84)
    Domains in SCOPe 2.08: d7ndya_
  • Chain 'B':
    Compound: Barrier-to-autointegration factor, N-terminally processed
    Species: Homo sapiens [TaxId:9606]
    Gene: BANF1, BAF, BCRG1
    Database cross-references and differences (RAF-indexed):
    • Uniprot O75531 (1-88)
      • conflict (66)
      • conflict (76)
      • conflict (79)
      • conflict (84)
    Domains in SCOPe 2.08: d7ndyb_
  • Chain 'G':
    Compound: emerin
    Species: Homo sapiens [TaxId:9606]
    Gene: EMD, EDMD, STA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7ndyg_
  • Heterogens: EPE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >7ndyA (A:)
gttsqkhrdfvaepmgekpvgslagigevlgkkleergfdkayvvlgqflvlkkdedlfr
ewlkdtaganakqsrdafgalrewadafl

    Sequence, based on observed residues (ATOM records): (download) 
    >7ndyA (A:)
ttsqkhrdfvaepmgekpvgslagigevlgkkleergfdkayvvlgqflvlkkdedlfre
wlkdtaganakqsrdafgalrewadafl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >7ndyB (B:)
gttsqkhrdfvaepmgekpvgslagigevlgkkleergfdkayvvlgqflvlkkdedlfr
ewlkdtaganakqsrdafgalrewadafl

    Sequence, based on observed residues (ATOM records): (download) 
    >7ndyB (B:)
ttsqkhrdfvaepmgekpvgslagigevlgkkleergfdkayvvlgqflvlkkdedlfre
wlkdtaganakqsrdafgalrewadafl

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >7ndyG (G:)
gdnyadlsdtelttllrryniphgpvvgstrrlyekkifeyetqrrrlsppsssaassys
fsdlnstrgdadmydlpkkedallyqskgynddyyeesyfttrtygepesagpsravrqs
vtsfpdadafhhqvhdddllssseeeckdrerpmygrdsayqsithyrpvsasrssldls
yyptsss

    Sequence, based on observed residues (ATOM records): (download) 
    >7ndyG (G:)
nyadlsdtelttllrryniphgpvvgstrrlyekkifeyetq