PDB entry 7mjs

View 7mjs on RCSB PDB site
Description: single-particle cryo-em structure of major facilitator superfamily domain containing 2a in complex with lpc-18:3
Deposited on 2021-04-20, released 2021-06-16
The last revision was dated 2021-07-28, with a file datestamp of 2021-07-23.
Experiment type: EM
Resolution: 3.03 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: 2AG3 Fab heavy chain
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 7MJS (0-239)
  • Chain 'L':
    Compound: 2AG3 Fab light chain
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 7MJS (0-216)
  • Chain 'X':
    Compound: Major Facilitator Superfamily Domain containing 2A
    Species: Gallus gallus [TaxId:9031]
    Gene: MFSD2A
    Database cross-references and differences (RAF-indexed):
    • Uniprot F1NCD6 (0-527)
      • expression tag (528-545)
  • Heterogens: ZGS, NAG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'H':
    Sequence, based on SEQRES records:
    >7mjsH (H:)
eisevqlvesggglvqpggslrlscaasgfniysssihwvrqapgkglewvayiysysgy
tsyadsvkgrftisadtskntaylqmnslraedtavyycarsleylyssgyqykwatgld
ywgqgtlvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgalts
gvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdktht

    Sequence, based on observed residues (ATOM records):
    >7mjsH (H:)
evqlvesggglvqpggslrlscaasgfniysssihwvrqapgkglewvayiysysgytsy
adsvkgrftisadtskntaylqmnslraedtavyycarsleylyssgyqykwatgldywg
qgtlvtvssast

  • Chain 'L':
    Sequence, based on SEQRES records:
    >7mjsL (L:)
sdiqmtqspsslsasvgdrvtitcrasqsvssavawyqqkpgkapklliysasslysgvp
srfsgsrsgtdftltisslqpedfatyycqqssfynqpftfgqgtkveikrtvaapsvfi
fppsdsqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslss
tltlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records):
    >7mjsL (L:)
diqmtqspsslsasvgdrvtitcrasqsvssavawyqqkpgkapklliysasslysgvps
rfsgsrsgtdftltisslqpedfatyycqqssfynqpftfgqgtkveikrtva

  • Chain 'X':
    Sequence, based on SEQRES records:
    >7mjsX (X:)
maggggaervrvgaaaagllppscrqprrresrerlsvcsklcyavggapyqttgcalgf
flqiylldvaqldpfyasiilfvgrawdaitdpmvgffisktpwtrfgrlmpwiifstpf
avisyfliwfvpdistgqvmwylifycifqtlvtcfhvpysaltmfisreqserdsatay
rmtvevlgtvlgtaiqgqivgkavtpcienppflsetnfsvairnvnmthytgsladtrn
aymvaagvigglyilcavilsvgvrekresselqsdepvsffrglklvmnhgayiklitg
flftslafmllegnfalfctytlgfrnefqnillaimlsatltipfwqwfltrfgkktav
yvgissavpflitvvvldsnlvvtyivavaagisvaaafllpwsmlpdviddfklqhpes
rgheaiffsfyvfftkftsgvslgistlsldfagyqtrgcsqpsevnitlkllvsavpvg
lillglllfklypideekrrenkkalqdlreesnsssesdstelanivenlyfqgshhhh
hhhhhh

    Sequence, based on observed residues (ATOM records):
    >7mjsX (X:)
lsvcsklcyavggapyqttgcalgfflqiylldvaqldpfyasiilfvgrawdaitdpmv
gffisktpwtrfgrlmpwiifstpfavisyfliwfvpdistgqvmwylifycifqtlvtc
fhvpysaltmfisreqserdsatayrmtvevlgtvlgtaiqgqivgkavtpcienppfls
etnfsvairnvnmthytgsladtrnaymvaagvigglyilcavilsvgvreksffrglkl
vmnhgayiklitgflftslafmllegnfalfctytlgfrnefqnillaimlsatltipfw
qwfltrfgkktavyvgissavpflitvvvldsnlvvtyivavaagisvaaafllpwsmlp
dviddfklqhpesrgheaiffsfyvfftkftsgvslgistlsldfagyqtrgcsqpsevn
itlkllvsavpvglillglllfklypideekrrenkka