PDB entry 7mdn

View 7mdn on RCSB PDB site
Description: histone-lysine n-methyltransferase nsd2-pwwp1 with compound mrt10241866a
Deposited on 2021-04-05, released 2021-05-05
The last revision was dated 2021-05-05, with a file datestamp of 2021-04-30.
Experiment type: XRAY
Resolution: 2.42 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Histone-lysine N-methyltransferase NSD2
    Species: Homo sapiens [TaxId:9606]
    Gene: NSD2, KIAA1090, MMSET, TRX5, WHSC1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Histone-lysine N-methyltransferase NSD2
    Species: Homo sapiens [TaxId:9606]
    Gene: NSD2, KIAA1090, MMSET, TRX5, WHSC1
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Histone-lysine N-methyltransferase NSD2
    Species: Homo sapiens [TaxId:9606]
    Gene: NSD2, KIAA1090, MMSET, TRX5, WHSC1
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Histone-lysine N-methyltransferase NSD2
    Species: Homo sapiens [TaxId:9606]
    Gene: NSD2, KIAA1090, MMSET, TRX5, WHSC1
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Histone-lysine N-methyltransferase NSD2
    Species: Homo sapiens [TaxId:9606]
    Gene: NSD2, KIAA1090, MMSET, TRX5, WHSC1
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Histone-lysine N-methyltransferase NSD2
    Species: Homo sapiens [TaxId:9606]
    Gene: NSD2, KIAA1090, MMSET, TRX5, WHSC1
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Histone-lysine N-methyltransferase NSD2
    Species: Homo sapiens [TaxId:9606]
    Gene: NSD2, KIAA1090, MMSET, TRX5, WHSC1
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Histone-lysine N-methyltransferase NSD2
    Species: Homo sapiens [TaxId:9606]
    Gene: NSD2, KIAA1090, MMSET, TRX5, WHSC1
    Database cross-references and differences (RAF-indexed):
  • Heterogens: Y6V, UNX, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7mdnA (A:)
    grdkdhllkynvgdlvwskvsgypwwpcmvsadpllhsytklkgqkksarqyhvqffgda
    perawifekslvafegegqfeklcqesakqaptkaekikllkpisgklraqwemgivqae
    eaasmsveerkakftflyvg
    

    Sequence, based on observed residues (ATOM records):
    >7mdnA (A:)
    kdhllkynvgdlvwskvsgypwwpcmvsadpllhsytklksarqyhvqffgdaperawif
    ekslvafegegqfeklcqesaktkaekikllkpisgklraqwemgivqaeeaasmsveer
    kakftfly
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7mdnB (B:)
    grdkdhllkynvgdlvwskvsgypwwpcmvsadpllhsytklkgqkksarqyhvqffgda
    perawifekslvafegegqfeklcqesakqaptkaekikllkpisgklraqwemgivqae
    eaasmsveerkakftflyvg
    

    Sequence, based on observed residues (ATOM records):
    >7mdnB (B:)
    kdhllkynvgdlvwskvsgypwwpcmvsadpllhsytklksarqyhvqffgdaperawif
    ekslvafegegqfeklcqesakqaptkaekikllkpisgklraqwemgivqaeeaasmsv
    eerkakftfly
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7mdnC (C:)
    grdkdhllkynvgdlvwskvsgypwwpcmvsadpllhsytklkgqkksarqyhvqffgda
    perawifekslvafegegqfeklcqesakqaptkaekikllkpisgklraqwemgivqae
    eaasmsveerkakftflyvg
    

    Sequence, based on observed residues (ATOM records):
    >7mdnC (C:)
    llkynvgdlvwskvsgypwwpcmvsadpllhsytklksarqyhvqffgdaperawifeks
    lvafegegqfeklcqesakqtkaekikllkpisgklraqwemgivqaeeaasmsveerka
    kftfly
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7mdnD (D:)
    grdkdhllkynvgdlvwskvsgypwwpcmvsadpllhsytklkgqkksarqyhvqffgda
    perawifekslvafegegqfeklcqesakqaptkaekikllkpisgklraqwemgivqae
    eaasmsveerkakftflyvg
    

    Sequence, based on observed residues (ATOM records):
    >7mdnD (D:)
    dhllkynvgdlvwskvsgypwwpcmvsadpllhsytklkksarqyhvqffgdaperawif
    ekslvafegegqfeklcqesakqatkaekikllkpisgklraqwemgivqaeeaasmsve
    erkakftfly
    

  • Chain 'E':
    Sequence, based on SEQRES records:
    >7mdnE (E:)
    grdkdhllkynvgdlvwskvsgypwwpcmvsadpllhsytklkgqkksarqyhvqffgda
    perawifekslvafegegqfeklcqesakqaptkaekikllkpisgklraqwemgivqae
    eaasmsveerkakftflyvg
    

    Sequence, based on observed residues (ATOM records):
    >7mdnE (E:)
    hllkynvgdlvwskvsgypwwpcmvsadpllhsytklkgsarqyhvqffgdaperawife
    kslvafegegqfeklcqesakqakllkpisgklraqwemgivqaeeaasmsveerkakft
    fly
    

  • Chain 'F':
    Sequence, based on SEQRES records:
    >7mdnF (F:)
    grdkdhllkynvgdlvwskvsgypwwpcmvsadpllhsytklkgqkksarqyhvqffgda
    perawifekslvafegegqfeklcqesakqaptkaekikllkpisgklraqwemgivqae
    eaasmsveerkakftflyvg
    

    Sequence, based on observed residues (ATOM records):
    >7mdnF (F:)
    llkynvgdlvwskvsgypwwpcmvsadpllhsytklksarqyhvqffgdaperawifeks
    lvafegegqfeklcqesakqatkaekikllkpisgklraqwemgivqaeeaasmsveerk
    akftfly
    

  • Chain 'G':
    Sequence, based on SEQRES records:
    >7mdnG (G:)
    grdkdhllkynvgdlvwskvsgypwwpcmvsadpllhsytklkgqkksarqyhvqffgda
    perawifekslvafegegqfeklcqesakqaptkaekikllkpisgklraqwemgivqae
    eaasmsveerkakftflyvg
    

    Sequence, based on observed residues (ATOM records):
    >7mdnG (G:)
    dhllkynvgdlvwskvsgypwwpcmvsadpllhsytklksarqyhvqffgdaperawife
    kslvafegegqfeklcqesakqakpisgklraqwemgivqaeeaasmsveerkakftfly
    

  • Chain 'H':
    Sequence, based on SEQRES records:
    >7mdnH (H:)
    grdkdhllkynvgdlvwskvsgypwwpcmvsadpllhsytklkgqkksarqyhvqffgda
    perawifekslvafegegqfeklcqesakqaptkaekikllkpisgklraqwemgivqae
    eaasmsveerkakftflyvg
    

    Sequence, based on observed residues (ATOM records):
    >7mdnH (H:)
    llkynvgdlvwskvsgypwwpcmvsadpllhsytklksarqyhvqffgdaperawifeks
    lvafegegqfeklcqesaaptkaekikllkpisgklraqwemgivqaeeaasmsveerka
    kftfly