PDB entry 7mdh

View 7mdh on RCSB PDB site
Description: structural basis for light acitvation of a chloroplast enzyme. the structure of sorghum nadp-malate dehydrogenase in its oxidized form
Class: chloroplastic malate dehydrogenase
Keywords: chloroplastic malate dehydrogenase (nadp+), activated by light, chloroplastic malate dehydrogenase
Deposited on 1999-02-16, released 1999-06-04
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.221
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (malate dehydrogenase)
    Species: SORGHUM BICOLOR [TaxId:4558]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7mdha1, d7mdha2
  • Chain 'B':
    Compound: protein (malate dehydrogenase)
    Species: SORGHUM BICOLOR [TaxId:4558]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7mdhb1, d7mdhb2
  • Chain 'C':
    Compound: protein (malate dehydrogenase)
    Species: SORGHUM BICOLOR [TaxId:4558]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7mdhc1, d7mdhc2
  • Chain 'D':
    Compound: protein (malate dehydrogenase)
    Species: SORGHUM BICOLOR [TaxId:4558]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7mdhd1, d7mdhd2
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >7mdhA (A:)
aeapatrkdcfgvfcttydlkaedktkswkklvniavsgaagmisnhllfklasgevfgq
dqpialkllgsersfqalegvameledslypllrevsigidpyevfedvdwalligakpr
gpgmeraalldingqifadqgkalnavasknvkvlvvgnpcntnaliclknapdipaknf
haltrldenrakcqlalkagvfydkvsnvtiwgnhsttqvpdflnakidgrpvkevikrt
kwleeeftitvqkrggaliqkwgrssaastavsiadaikslvtptpegdwfstgvyttgn
pygiaedivfsmpcrskgdgdyelatdvsnddflwerikkseaellaekkcvahltgegn
aycdvpedtmlpgev

    Sequence, based on observed residues (ATOM records): (download) 
    >7mdhA (A:)
dcfgvfctwkklvniavsgaagmisnhllfklasgevfgqdqpialkllgsersfqaleg
vameledslypllrevsigidpyevfedvdwalligakprgpgmeraalldingqifadq
gkalnavasknvkvlvvgnpcntnaliclknapdipaknfhaltrldenrakcqlalkag
vfydkvsnvtiwgnhsttqvpdflnakidgrpvkevikrtkwleeeftitvqkrggaliq
kwgrssaastavsiadaikslvtptpegdwfstgvyttgnpygiaedivfsmpcrskgdg
dyelatdvsnddflwerikkseaellaekkcvahltgegnaycdvpedtml

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >7mdhB (B:)
aeapatrkdcfgvfcttydlkaedktkswkklvniavsgaagmisnhllfklasgevfgq
dqpialkllgsersfqalegvameledslypllrevsigidpyevfedvdwalligakpr
gpgmeraalldingqifadqgkalnavasknvkvlvvgnpcntnaliclknapdipaknf
haltrldenrakcqlalkagvfydkvsnvtiwgnhsttqvpdflnakidgrpvkevikrt
kwleeeftitvqkrggaliqkwgrssaastavsiadaikslvtptpegdwfstgvyttgn
pygiaedivfsmpcrskgdgdyelatdvsnddflwerikkseaellaekkcvahltgegn
aycdvpedtmlpgev

    Sequence, based on observed residues (ATOM records): (download) 
    >7mdhB (B:)
rkdcfgvfcttydlkswkklvniavsgaagmisnhllfklasgevfgqdqpialkllgse
rsfqalegvameledslypllrevsigidpyevfedvdwalligakprgpgmeraalldi
ngqifadqgkalnavasknvkvlvvgnpcntnaliclknapdipaknfhaltrldenrak
cqlalkagvfydkvsnvtiwgnhsttqvpdflnakidgrpvkevikrtkwleeeftitvq
krggaliqkwgrssaastavsiadaikslvtptpegdwfstgvyttgnpygiaedivfsm
pcrskgdgdyelatdvsnddflwerikkseaellaekkcvahltgegnaycdvpedtmlp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >7mdhC (C:)
aeapatrkdcfgvfcttydlkaedktkswkklvniavsgaagmisnhllfklasgevfgq
dqpialkllgsersfqalegvameledslypllrevsigidpyevfedvdwalligakpr
gpgmeraalldingqifadqgkalnavasknvkvlvvgnpcntnaliclknapdipaknf
haltrldenrakcqlalkagvfydkvsnvtiwgnhsttqvpdflnakidgrpvkevikrt
kwleeeftitvqkrggaliqkwgrssaastavsiadaikslvtptpegdwfstgvyttgn
pygiaedivfsmpcrskgdgdyelatdvsnddflwerikkseaellaekkcvahltgegn
aycdvpedtmlpgev

    Sequence, based on observed residues (ATOM records): (download) 
    >7mdhC (C:)
dcfgvfcttswkklvniavsgaagmisnhllfklasgevfgqdqpialkllgsersfqal
egvameledslypllrevsigidpyevfedvdwalligakprgpgmeraalldingqifa
dqgkalnavasknvkvlvvgnpcntnaliclknapdipaknfhaltrldenrakcqlalk
agvfydkvsnvtiwgnhsttqvpdflnakidgrpvkevikrtkwleeeftitvqkrggal
iqkwgrssaastavsiadaikslvtptpegdwfstgvyttgnpygiaedivfsmpcrskg
dgdyelatdvsnddflwerikkseaellaekkcvahltgegnaycdvpedtm

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >7mdhD (D:)
aeapatrkdcfgvfcttydlkaedktkswkklvniavsgaagmisnhllfklasgevfgq
dqpialkllgsersfqalegvameledslypllrevsigidpyevfedvdwalligakpr
gpgmeraalldingqifadqgkalnavasknvkvlvvgnpcntnaliclknapdipaknf
haltrldenrakcqlalkagvfydkvsnvtiwgnhsttqvpdflnakidgrpvkevikrt
kwleeeftitvqkrggaliqkwgrssaastavsiadaikslvtptpegdwfstgvyttgn
pygiaedivfsmpcrskgdgdyelatdvsnddflwerikkseaellaekkcvahltgegn
aycdvpedtmlpgev

    Sequence, based on observed residues (ATOM records): (download) 
    >7mdhD (D:)
rkdcfgvfcttydwkklvniavsgaagmisnhllfklasgevfgqdqpialkllgsersf
qalegvameledslypllrevsigidpyevfedvdwalligakprgpgmeraalldingq
ifadqgkalnavasknvkvlvvgnpcntnaliclknapdipaknfhaltrldenrakcql
alkagvfydkvsnvtiwgnhsttqvpdflnakidgrpvkevikrtkwleeeftitvqkrg
galiqkwgrssaastavsiadaikslvtptpegdwfstgvyttgnpygiaedivfsmpcr
skgdgdyelatdvsnddflwerikkseaellaekkcvahltgegnaycdvpe