PDB entry 7m55

View 7m55 on RCSB PDB site
Description: b6 fab fragment bound to the mers-cov spike stem helix peptide
Deposited on 2021-03-22, released 2021-05-26
The last revision was dated 2021-06-23, with a file datestamp of 2021-06-18.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: N/A
AEROSPACI score: 0.61 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Spike glycoprotein stem helix peptide
    Species: Middle East respiratory syndrome-related coronavirus, synthetic [TaxId:1335626]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: B6 antigen binding fragment (Fab) heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 7M55 (0-219)
  • Chain 'L':
    Compound: B6 antigen binding fragment (Fab) light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 7M55 (0-End)
  • Heterogens: GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7m55A (A:)
dfqdeldeffknvst

    Sequence, based on observed residues (ATOM records):
    >7m55A (A:)
dfqdeldeffk

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >7m55H (H:)
evqlqqsgpvlvkpgasvrmsckasgytitdyylnwvkqshgkslewlgvlnpysggsly
sqtfkgkatltvdrssstaylelnsltsedsavyycarqlgrgngldywgqgtsvtvssv
stkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssg
lyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepk

  • Chain 'L':
    Sequence, based on SEQRES records:
    >7m55L (L:)
nimmtqspsslavsagekvtmsckssqsvlhssdqknylawyqqkpgqspklliywastr
esgvpdrftgsgsgtdftltissvqaedlavyfchqylssytfgggtkleikrtvaapsv
fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
sstltlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records):
    >7m55L (L:)
nimmtqspsslavsagekvtmsckssqsvlhssdqknylawyqqkpgqspklliywastr
esgvpdrftgsgsgtdftltissvqaedlavyfchqylssytfgggtkleikrtvaapsv
fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
sstltlskadyekhkvyacevthqglsspvtksfnrge