PDB entry 7m13

View 7m13 on RCSB PDB site
Description: Crystal structure of CJ1428, a GDP-D-GLYCERO-L-GLUCO-HEPTOSE SYNTHASE from campylobacter jejuni in the presence of NADPH
Class: oxidoreductase
Keywords: gluco-heptose synthase, capsular polysaccharide, OXIDOREDUCTASE
Deposited on 2021-03-12, released 2021-03-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-06-02, with a file datestamp of 2021-05-28.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.57 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: GDP-l-fucose synthase
    Species: Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) [TaxId:192222]
    Gene: fcl, Cj1428c
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q0P8I6 (4-End)
      • expression tag (2-3)
    Domains in SCOPe 2.08: d7m13a1, d7m13a2
  • Chain 'B':
    Compound: GDP-l-fucose synthase
    Species: Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) [TaxId:192222]
    Gene: fcl, Cj1428c
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q0P8I6 (4-End)
      • expression tag (3)
    Domains in SCOPe 2.08: d7m13b1, d7m13b2
  • Heterogens: NAP, MG, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >7m13A (A:)
ggghmqtnskiyiaghkgtagtalvenlqkrgfnnlvlktrqeldlvnqqavakffkeek
peyvfltavlpcgaanvaqradfiyenlmiqnnvihnsflnnvkklvffgsgymypenak
nplkeeylfqgdleygaysfgaakiagaimcesyniqygtnfitlvlnnlygtkanfdfg
ksrvlpallrkfhlakllsegnitqilqdlkmnnfeeakeylhnfgiskksveiwgtgkv
rrefihsddladvaiytmqnidfkdlikdrksknthinigtgidysikevalmvknivgf
sgelvfntsrpdstmdrlmdcskihslgwkhkielkdgikmmyewyktqn

    Sequence, based on observed residues (ATOM records): (download) 
    >7m13A (A:)
ghmqtnskiyiaghkgtagtalvenlqkrgfnnlvlktrqeldlvnqqavakffkeekpe
yvfltavlpcgaanvaqradfiyenlmiqnnvihnsflnnvkklvffgsgymypenaknp
lkeeylfqgdleygaysfgaakiagaimcesyniqygtnfitlvlnnlygtkanfdfgks
rvlpallrkfhlakllsegnitqilqdlkmnnfeeakeylhnfgiskksveiwgtgkvrr
efihsddladvaiytmqnidfkdliksknthinigtgidysikevalmvknivgfsgelv
fntmdrlmdcskihslgwkhkielkdgikmmyewyktq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >7m13B (B:)
ggghmqtnskiyiaghkgtagtalvenlqkrgfnnlvlktrqeldlvnqqavakffkeek
peyvfltavlpcgaanvaqradfiyenlmiqnnvihnsflnnvkklvffgsgymypenak
nplkeeylfqgdleygaysfgaakiagaimcesyniqygtnfitlvlnnlygtkanfdfg
ksrvlpallrkfhlakllsegnitqilqdlkmnnfeeakeylhnfgiskksveiwgtgkv
rrefihsddladvaiytmqnidfkdlikdrksknthinigtgidysikevalmvknivgf
sgelvfntsrpdstmdrlmdcskihslgwkhkielkdgikmmyewyktqn

    Sequence, based on observed residues (ATOM records): (download) 
    >7m13B (B:)
hmqtnskiyiaghkgtagtalvenlqkrgfnnlvlktrqeldlvnqqavakffkeekpey
vfltavlpcgaanvaqradfiyenlmiqnnvihnsflnnvkklvffgsgymypenaknpl
keeylfqgdleygaysfgaakiagaimcesyniqygtnfitlvlnnlygtkanfdfgksr
vlpallrkfhlakllsegnitqilqdlkmnnfeeakeylhnfgiskksveiwgtgkvrre
fihsddladvaiytmqnidfkdlikdrksknthinigtgidysikevalmvknivgfsge
lvfnttmdrlmdcskihslgwkhkielkdgikmmyewykt