PDB entry 7lvw

View 7lvw on RCSB PDB site
Description: Structure of RSV F in Complex with VHH Cl184
Class: immune system/viral protein
Keywords: nanobody, VHH, antibody, fusion protein, virus complex, IMMUNE SYSTEM, IMMUNE SYSTEM-VIRAL PROTEIN complex
Deposited on 2021-02-26, released 2021-03-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-03-24, with a file datestamp of 2021-03-19.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fusion glycoprotein F0
    Species: RESPIRATORY SYNCYTIAL VIRUS [TaxId:12814]
    Database cross-references and differences (RAF-indexed):
    • Uniprot W8RJF9 (Start-460)
      • conflict (40-41)
      • conflict (162)
      • expression tag (461-499)
  • Chain 'B':
    Compound: Fusion glycoprotein F0
    Species: RESPIRATORY SYNCYTIAL VIRUS [TaxId:12814]
    Database cross-references and differences (RAF-indexed):
    • Uniprot W8RJF9 (Start-460)
      • conflict (40-41)
      • conflict (162)
      • expression tag (461-499)
  • Chain 'C':
    Compound: Fusion glycoprotein F0
    Species: RESPIRATORY SYNCYTIAL VIRUS [TaxId:12814]
    Database cross-references and differences (RAF-indexed):
    • Uniprot W8RJF9 (Start-460)
      • conflict (40-41)
      • conflict (162)
      • expression tag (461-499)
  • Chain 'D':
    Compound: Fusion glycoprotein F0
    Species: RESPIRATORY SYNCYTIAL VIRUS [TaxId:12814]
    Database cross-references and differences (RAF-indexed):
    • Uniprot W8RJF9 (Start-460)
      • conflict (40-41)
      • conflict (162)
      • expression tag (461-499)
  • Chain 'E':
    Compound: Fusion glycoprotein F0
    Species: RESPIRATORY SYNCYTIAL VIRUS [TaxId:12814]
    Database cross-references and differences (RAF-indexed):
    • Uniprot W8RJF9 (Start-460)
      • conflict (40-41)
      • conflict (162)
      • expression tag (461-499)
  • Chain 'F':
    Compound: Fusion glycoprotein F0
    Species: RESPIRATORY SYNCYTIAL VIRUS [TaxId:12814]
    Database cross-references and differences (RAF-indexed):
    • Uniprot W8RJF9 (Start-460)
      • conflict (40-41)
      • conflict (162)
      • expression tag (461-499)
  • Chain 'G':
    Compound: F-VHH-Cl184
    Species: Lama glama [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 7LVW
    Domains in SCOPe 2.08: d7lvwg1, d7lvwg2
  • Chain 'H':
    Compound: F-VHH-Cl184
    Species: Lama glama [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 7LVW
    Domains in SCOPe 2.08: d7lvwh1, d7lvwh2
  • Chain 'I':
    Compound: F-VHH-Cl184
    Species: Lama glama [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 7LVW
    Domains in SCOPe 2.08: d7lvwi1, d7lvwi2
  • Chain 'J':
    Compound: F-VHH-Cl184
    Species: Lama glama [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 7LVW
    Domains in SCOPe 2.08: d7lvwj1, d7lvwj2
  • Chain 'K':
    Compound: F-VHH-Cl184
    Species: Lama glama [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 7LVW
    Domains in SCOPe 2.08: d7lvwk1, d7lvwk2
  • Chain 'L':
    Compound: F-VHH-Cl184
    Species: Lama glama [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 7LVW
    Domains in SCOPe 2.08: d7lvwl1, d7lvwl2
  • Heterogens: NAG, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >7lvwG (G:)
    mrptwawwlflvlllalwapargqvqlqesggglvqaggslrlscaasgqtfsgyvtgwf
    rqapgkerefvaliawsggrlyyadsvqgrftisrdnaettvylqmnslkpedtavyyca
    akrggavtaaewydywgqgtqvtvsshhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >7lvwG (G:)
    qvqlqesggglvqaggslrlscaasgqtfsgyvtgwfrqapgkerefvaliawsggrlyy
    adsvqgrftisrdnaettvylqmnslkpedtavyycaakrggavtaaewydywgqgtqvt
    vss
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >7lvwH (H:)
    mrptwawwlflvlllalwapargqvqlqesggglvqaggslrlscaasgqtfsgyvtgwf
    rqapgkerefvaliawsggrlyyadsvqgrftisrdnaettvylqmnslkpedtavyyca
    akrggavtaaewydywgqgtqvtvsshhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >7lvwH (H:)
    qvqlqesggglvqaggslrlscaasgqtfsgyvtgwfrqapgkerefvaliawsggrlyy
    adsvqgrftisrdnaettvylqmnslkpedtavyycaakrggavtaaewydywgqgtqvt
    vss
    

  • Chain 'I':
    Sequence, based on SEQRES records: (download)
    >7lvwI (I:)
    mrptwawwlflvlllalwapargqvqlqesggglvqaggslrlscaasgqtfsgyvtgwf
    rqapgkerefvaliawsggrlyyadsvqgrftisrdnaettvylqmnslkpedtavyyca
    akrggavtaaewydywgqgtqvtvsshhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >7lvwI (I:)
    qvqlqesggglvqaggslrlscaasgqtfsgyvtgwfrqapgkerefvaliawsggrlyy
    adsvqgrftisrdnaettvylqmnslkpedtavyycaakrggavtaaewydywgqgtqvt
    vss
    

  • Chain 'J':
    Sequence, based on SEQRES records: (download)
    >7lvwJ (J:)
    mrptwawwlflvlllalwapargqvqlqesggglvqaggslrlscaasgqtfsgyvtgwf
    rqapgkerefvaliawsggrlyyadsvqgrftisrdnaettvylqmnslkpedtavyyca
    akrggavtaaewydywgqgtqvtvsshhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >7lvwJ (J:)
    qvqlqesggglvqaggslrlscaasgqtfsgyvtgwfrqapgkerefvaliawsggrlyy
    adsvqgrftisrdnaettvylqmnslkpedtavyycaakrggavtaaewydywgqgtqvt
    vss
    

  • Chain 'K':
    Sequence, based on SEQRES records: (download)
    >7lvwK (K:)
    mrptwawwlflvlllalwapargqvqlqesggglvqaggslrlscaasgqtfsgyvtgwf
    rqapgkerefvaliawsggrlyyadsvqgrftisrdnaettvylqmnslkpedtavyyca
    akrggavtaaewydywgqgtqvtvsshhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >7lvwK (K:)
    qvqlqesggglvqaggslrlscaasgqtfsgyvtgwfrqapgkerefvaliawsggrlyy
    adsvqgrftisrdnaettvylqmnslkpedtavyycaakrggavtaaewydywgqgtqvt
    v
    

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >7lvwL (L:)
    mrptwawwlflvlllalwapargqvqlqesggglvqaggslrlscaasgqtfsgyvtgwf
    rqapgkerefvaliawsggrlyyadsvqgrftisrdnaettvylqmnslkpedtavyyca
    akrggavtaaewydywgqgtqvtvsshhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >7lvwL (L:)
    qvqlqesggglvqaggslrlscaasgqtfsgyvtgwfrqapgkerefvaliawsggrlyy
    adsvqgrftisrdnaettvylqmnslkpedtavyycaakrggavtaaewydywgqgtqvt
    vss