PDB entry 7loi

View 7loi on RCSB PDB site
Description: model of the hiv-1 gp41 membrane-proximal external region, transmembrane domain and cytoplasmic tail
Deposited on 2021-02-10, released 2021-04-28
The last revision was dated 2021-05-19, with a file datestamp of 2021-05-14.
Experiment type: NMR
Resolution: N/A
R-factor: N/A
AEROSPACI score: 0.03 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Transmembrane protein gp41
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Gene: ENV
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A386YSI0 (0-196)
      • conflict (14)
      • conflict (23)
      • conflict (27)
      • conflict (31)
      • conflict (33)
      • conflict (44)
      • engineered mutation (104)
      • engineered mutation (163)
      • engineered mutation (177)
  • Chain 'B':
    Compound: Transmembrane protein gp41
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Gene: ENV
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A386YSI0 (0-196)
      • conflict (14)
      • conflict (23)
      • conflict (27)
      • conflict (31)
      • conflict (33)
      • conflict (44)
      • engineered mutation (104)
      • engineered mutation (163)
      • engineered mutation (177)
  • Chain 'C':
    Compound: Transmembrane protein gp41
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Gene: ENV
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A386YSI0 (0-196)
      • conflict (14)
      • conflict (23)
      • conflict (27)
      • conflict (31)
      • conflict (33)
      • conflict (44)
      • engineered mutation (104)
      • engineered mutation (163)
      • engineered mutation (177)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7loiA (A:)
lleldkwaslwnwfditnwlwyirifiiivgsliglrivfavlslvnrvrqgysplsfqt
hlptprgpdrpegieeeggerdrdrsirlvngslaliwddlrslslfsyhrlrdlllivt
rivellgrrgwealkywwnllqywsqelknsavsllnataiavgegtdrvievvqgasra
irhiprrirqglerill

    Sequence, based on observed residues (ATOM records):
    >7loiA (A:)
lleldkwaslwnwfditnwlwyirifiiivgsliglrivfavlslvnrvrqgysplserd
rdrsirlvngslaliwddlrslslfsyhrlrdlllivtrivellgrrgwealkywwnllq
ywsqelknsavsllnataiavgegtdrvievvqgasrairhiprrirqglerill

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7loiB (B:)
lleldkwaslwnwfditnwlwyirifiiivgsliglrivfavlslvnrvrqgysplsfqt
hlptprgpdrpegieeeggerdrdrsirlvngslaliwddlrslslfsyhrlrdlllivt
rivellgrrgwealkywwnllqywsqelknsavsllnataiavgegtdrvievvqgasra
irhiprrirqglerill

    Sequence, based on observed residues (ATOM records):
    >7loiB (B:)
lleldkwaslwnwfditnwlwyirifiiivgsliglrivfavlslvnrvrqgysplserd
rdrsirlvngslaliwddlrslslfsyhrlrdlllivtrivellgrrgwealkywwnllq
ywsqelknsavsllnataiavgegtdrvievvqgasrairhiprrirqglerill

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7loiC (C:)
lleldkwaslwnwfditnwlwyirifiiivgsliglrivfavlslvnrvrqgysplsfqt
hlptprgpdrpegieeeggerdrdrsirlvngslaliwddlrslslfsyhrlrdlllivt
rivellgrrgwealkywwnllqywsqelknsavsllnataiavgegtdrvievvqgasra
irhiprrirqglerill

    Sequence, based on observed residues (ATOM records):
    >7loiC (C:)
lleldkwaslwnwfditnwlwyirifiiivgsliglrivfavlslvnrvrqgysplserd
rdrsirlvngslaliwddlrslslfsyhrlrdlllivtrivellgrrgwealkywwnllq
ywsqelknsavsllnataiavgegtdrvievvqgasrairhiprrirqglerill