PDB entry 7ljn

View 7ljn on RCSB PDB site
Description: structure of the bradyrhizobium diazoefficiens cd-ntase cdng in complex with gtp
Deposited on 2021-01-29, released 2021-06-02
The last revision was dated 2021-07-14, with a file datestamp of 2021-07-09.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: CD-NTase
    Species: Bradyrhizobium diazoefficiens [TaxId:1355477]
    Gene: blr0072
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q89Y83 (1-415)
      • expression tag (0)
  • Chain 'B':
    Compound: CD-NTase
    Species: Bradyrhizobium diazoefficiens [TaxId:1355477]
    Gene: blr0072
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q89Y83 (1-415)
      • expression tag (0)
  • Chain 'C':
    Compound: CD-NTase
    Species: Bradyrhizobium diazoefficiens [TaxId:1355477]
    Gene: blr0072
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q89Y83 (1-415)
      • expression tag (0)
  • Chain 'D':
    Compound: CD-NTase
    Species: Bradyrhizobium diazoefficiens [TaxId:1355477]
    Gene: blr0072
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q89Y83 (1-415)
      • expression tag (0)
  • Heterogens: GTP, MG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7ljnA (A:)
ssnfpslrrddrpddpfadpldavlaelainiqlppglhakaveryeavrryierpgspl
egrvacfypqgsmaidattstrgtddeydldivaeiegpdlgpeallddleaalesypvs
kvvrqtrcitlyyadgmhlditpsrrrapkekegeiphakkgtrsdparyvpmnsyafgk
wycartpteerfalalnrqlyeqagiafaaadvedvppqtpliiksvttvalqlikrhrn
iayatetgrippsvmlschaghaarpgmrlaemlirqarwtaraiddaakrgqllvvpnp
efpverftdrwpesqlqqttysrhlhtlangleaartgdvqledlqewlrgqfgdrvvtr
svkafnqrlgrqvqsrqhgytrsgglfvpaapaiigaatslapvaarahtnmgerr

    Sequence, based on observed residues (ATOM records):
    >7ljnA (A:)
dpfadpldavlaelainiqlppglhakaveryeavrryierpgsplegrvacfypqgsma
idattstrgtddeydldivaeiegpdlgpeallddleaalesypvskvvrqtrcitlyya
dgmhlditpsrrrapkekegeiphaparyvpmnsyafgkwycartpteerfalalnrqly
eqagiafaaadvedvppqtpliiksvttvalqlikrhrniayatetgrippsvmlschag
haarpgmrlaemlirqarwtaraiddaakrgqllvvpnpefpverftdrwpesqlqqtty
srhlhtlangleaartledlqewlrgqfgdrvvtrsvkafnq

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7ljnB (B:)
ssnfpslrrddrpddpfadpldavlaelainiqlppglhakaveryeavrryierpgspl
egrvacfypqgsmaidattstrgtddeydldivaeiegpdlgpeallddleaalesypvs
kvvrqtrcitlyyadgmhlditpsrrrapkekegeiphakkgtrsdparyvpmnsyafgk
wycartpteerfalalnrqlyeqagiafaaadvedvppqtpliiksvttvalqlikrhrn
iayatetgrippsvmlschaghaarpgmrlaemlirqarwtaraiddaakrgqllvvpnp
efpverftdrwpesqlqqttysrhlhtlangleaartgdvqledlqewlrgqfgdrvvtr
svkafnqrlgrqvqsrqhgytrsgglfvpaapaiigaatslapvaarahtnmgerr

    Sequence, based on observed residues (ATOM records):
    >7ljnB (B:)
dpldavlaelainiqlppglhakaveryeavrryierpgsplegrvacfypqgsmaidat
tstrgtddeydldivaeiegpdlgpeallddleaalesypvskvvrqtrcitlyyadgmh
lditpsrrrapkekegeiphaparyvpmnsyafgkwycartpteerfalalnrqlyeqag
iafaaadvedvppqtpliiksvttvalqlikrhrniayatetgrippsvmlschaghaar
pgmrlaemlirqarwtaraiddaakrgqllvvpnpefpverftdrwpesqlqqttysrhl
htlangleaartlqewlrgqfgdrvvtrsvkafnq

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7ljnC (C:)
ssnfpslrrddrpddpfadpldavlaelainiqlppglhakaveryeavrryierpgspl
egrvacfypqgsmaidattstrgtddeydldivaeiegpdlgpeallddleaalesypvs
kvvrqtrcitlyyadgmhlditpsrrrapkekegeiphakkgtrsdparyvpmnsyafgk
wycartpteerfalalnrqlyeqagiafaaadvedvppqtpliiksvttvalqlikrhrn
iayatetgrippsvmlschaghaarpgmrlaemlirqarwtaraiddaakrgqllvvpnp
efpverftdrwpesqlqqttysrhlhtlangleaartgdvqledlqewlrgqfgdrvvtr
svkafnqrlgrqvqsrqhgytrsgglfvpaapaiigaatslapvaarahtnmgerr

    Sequence, based on observed residues (ATOM records):
    >7ljnC (C:)
dpfadpldavlaelainiqlppglhakaveryeavrryierpgsplegrvacfypqgsma
idattstrgtddeydldivaeiegpdlgpeallddleaalesypvskvvrqtrcitlyya
dgmhlditpsrrrapkekegeiphadparyvpmnsyafgkwycartpteerfalalnrql
yeqagiafaaadvedvppqtpliiksvttvalqlikrhrniayatetgrippsvmlscha
ghaarpgmrlaemlirqarwtaraiddaakrgqllvvpnpefpverftdrwpesqlqqtt
ysrhlhtlangleaartlqewlrgqfgdrvvtrsvka

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7ljnD (D:)
ssnfpslrrddrpddpfadpldavlaelainiqlppglhakaveryeavrryierpgspl
egrvacfypqgsmaidattstrgtddeydldivaeiegpdlgpeallddleaalesypvs
kvvrqtrcitlyyadgmhlditpsrrrapkekegeiphakkgtrsdparyvpmnsyafgk
wycartpteerfalalnrqlyeqagiafaaadvedvppqtpliiksvttvalqlikrhrn
iayatetgrippsvmlschaghaarpgmrlaemlirqarwtaraiddaakrgqllvvpnp
efpverftdrwpesqlqqttysrhlhtlangleaartgdvqledlqewlrgqfgdrvvtr
svkafnqrlgrqvqsrqhgytrsgglfvpaapaiigaatslapvaarahtnmgerr

    Sequence, based on observed residues (ATOM records):
    >7ljnD (D:)
pfadpldavlaelainiqlppglhakaveryeavrryierpgsplegrvacfypqgsmai
dattstrgtddeydldivaeiegpdlgpeallddleaalesypvskvvrqtrcitlyyad
gmhlditpsrrrapkekegeiphaparyvpmnsyafgkwycartpteerfalalnrqlye
qagiafaaadvedvppqtpliiksvttvalqlikrhrniayatetgrippsvmlschagh
aarpgmrlaemlirqarwtaraiddaakrgqllvvpnpefpverftdrwpesqlqqttys
rhlhtlangleaaredlqewlrgqfgdrvvtrsvkafnq