PDB entry 7ljf

View 7ljf on RCSB PDB site
Description: cryo-em structure of the mpa hexamer in the presence of atp and the pup-fabd substrate
Deposited on 2021-01-29, released 2021-05-05
The last revision was dated 2021-05-05, with a file datestamp of 2021-04-30.
Experiment type: EM
Resolution: 4 Å
R-factor: N/A
AEROSPACI score: 0.1 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: AAA ATPase forming ring-shaped complexes
    Species: Mycobacterium tuberculosis [TaxId:1773]
    Gene: arc, mpa, DSI38_15585, E5M52_17490, ERS007661_01151, ERS007665_00732, ERS007679_01634, ERS007681_02311, ERS007703_01049, ERS007720_01453, ERS007722_00998, ERS007741_01455, ERS023446_02559, ERS024276_00114, ERS027646_02035, ERS027659_02128, ERS027661_00811, ERS075361_03050, ERS094182_01863, F6W99_00704, FRD82_11355, SAMEA2683035_00457
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: AAA ATPase forming ring-shaped complexes
    Species: Mycobacterium tuberculosis [TaxId:1773]
    Gene: arc, mpa, DSI38_15585, E5M52_17490, ERS007661_01151, ERS007665_00732, ERS007679_01634, ERS007681_02311, ERS007703_01049, ERS007720_01453, ERS007722_00998, ERS007741_01455, ERS023446_02559, ERS024276_00114, ERS027646_02035, ERS027659_02128, ERS027661_00811, ERS075361_03050, ERS094182_01863, F6W99_00704, FRD82_11355, SAMEA2683035_00457
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: AAA ATPase forming ring-shaped complexes
    Species: Mycobacterium tuberculosis [TaxId:1773]
    Gene: arc, mpa, DSI38_15585, E5M52_17490, ERS007661_01151, ERS007665_00732, ERS007679_01634, ERS007681_02311, ERS007703_01049, ERS007720_01453, ERS007722_00998, ERS007741_01455, ERS023446_02559, ERS024276_00114, ERS027646_02035, ERS027659_02128, ERS027661_00811, ERS075361_03050, ERS094182_01863, F6W99_00704, FRD82_11355, SAMEA2683035_00457
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: AAA ATPase forming ring-shaped complexes
    Species: Mycobacterium tuberculosis [TaxId:1773]
    Gene: arc, mpa, DSI38_15585, E5M52_17490, ERS007661_01151, ERS007665_00732, ERS007679_01634, ERS007681_02311, ERS007703_01049, ERS007720_01453, ERS007722_00998, ERS007741_01455, ERS023446_02559, ERS024276_00114, ERS027646_02035, ERS027659_02128, ERS027661_00811, ERS075361_03050, ERS094182_01863, F6W99_00704, FRD82_11355, SAMEA2683035_00457
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: AAA ATPase forming ring-shaped complexes
    Species: Mycobacterium tuberculosis [TaxId:1773]
    Gene: arc, mpa, DSI38_15585, E5M52_17490, ERS007661_01151, ERS007665_00732, ERS007679_01634, ERS007681_02311, ERS007703_01049, ERS007720_01453, ERS007722_00998, ERS007741_01455, ERS023446_02559, ERS024276_00114, ERS027646_02035, ERS027659_02128, ERS027661_00811, ERS075361_03050, ERS094182_01863, F6W99_00704, FRD82_11355, SAMEA2683035_00457
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: AAA ATPase forming ring-shaped complexes
    Species: Mycobacterium tuberculosis [TaxId:1773]
    Gene: arc, mpa, DSI38_15585, E5M52_17490, ERS007661_01151, ERS007665_00732, ERS007679_01634, ERS007681_02311, ERS007703_01049, ERS007720_01453, ERS007722_00998, ERS007741_01455, ERS023446_02559, ERS024276_00114, ERS027646_02035, ERS027659_02128, ERS027661_00811, ERS075361_03050, ERS094182_01863, F6W99_00704, FRD82_11355, SAMEA2683035_00457
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ADP, ATP, MG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7ljfA (A:)
mgeserseafgiprdsplssgdaaeleqlrreaavlreqlenavgshaptrsardihqle
aridslaarnsklmetlkearqqllalreevdrlgqppsgygvllathdddtvdvftsgr
kmrltcspnidaaslkkgqtvrlnealtvveagtfeavgeistlreiladghralvvgha
deervvwladpliaedlpdglpealnddtrprklrpgdsllvdtkagyaferipkaeved
lvleevpdvsyadigglsrqieqirdavelpflhkelyreyslrppkgvllygppgcgkt
liakavanslakkmaevrgddaheaksyflnikgpellnkfvgeterhirlifqrareka
segtpvivffdemdsifrtrgtgvssdvettvvpqllseidgveglenvivigasnredm
idpailrpgrldvkikierpdaeaaqdiyskylteflpvhaddlaefdgdrsacikamie
kvvdrmyaeiddnrflevtyangdkevmyfkdfnsgamiqnvvdrakknaiksvletgqp
glriqhlldsivdefaenedlpnttnpddwarisgkkgerivyirtlvtgksssasraid
t

    Sequence, based on observed residues (ATOM records):
    >7ljfA (A:)
ppsgygvllathdddtvdvftsgrkmrltcspnidaaslkkgqtvrlnealtvveagtfe
avgeistlreiladghralvvghadeervvwladpliprklrpgdsllvdtkagyaferi
pkaevedlvleevpdvsyadigglsrqieqirdavelpflhkelyreyslrppkgvllyg
ppgcgktliakavanslakkmaksyflnikgpellngeterhirlifqrarekasegtpv
ivffdemdsifvvpqllseidgveglenvivigasnredmidpailrpgrldvkikierp
daeaaqdiyskylteflpvhaddlaefdgdrsacikamiekvvdrmyaeiddnrflevty
angdkevmyfkdfnsgamiqnvvdrakknaiksvletgqpglriqhlldsivdefaened
lpnttnpddwarisgkkgerivyirtlasraidt

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7ljfB (B:)
mgeserseafgiprdsplssgdaaeleqlrreaavlreqlenavgshaptrsardihqle
aridslaarnsklmetlkearqqllalreevdrlgqppsgygvllathdddtvdvftsgr
kmrltcspnidaaslkkgqtvrlnealtvveagtfeavgeistlreiladghralvvgha
deervvwladpliaedlpdglpealnddtrprklrpgdsllvdtkagyaferipkaeved
lvleevpdvsyadigglsrqieqirdavelpflhkelyreyslrppkgvllygppgcgkt
liakavanslakkmaevrgddaheaksyflnikgpellnkfvgeterhirlifqrareka
segtpvivffdemdsifrtrgtgvssdvettvvpqllseidgveglenvivigasnredm
idpailrpgrldvkikierpdaeaaqdiyskylteflpvhaddlaefdgdrsacikamie
kvvdrmyaeiddnrflevtyangdkevmyfkdfnsgamiqnvvdrakknaiksvletgqp
glriqhlldsivdefaenedlpnttnpddwarisgkkgerivyirtlvtgksssasraid
t

    Sequence, based on observed residues (ATOM records):
    >7ljfB (B:)
ppsgygvllathdddtvdvftsgrkmrltcspnidaaslkkgqtvrlnealtvveagtfe
avgeistlreiladghralvvghadeervvwladpliprklrpgdsllvdtkagyaferi
pkaevedlvleevpdvsyadigglsrqieqirdavelpflhkelyreyslrppkgvllyg
ppgcgktliakavanslakkmaksyflnikgpellngeterhirlifqrarekasegtpv
ivffdemdsifvvpqllseidgveglenvivigasnredmidpailrpgrldvkikierp
daeaaqdiyskylteflpvhaddlaefdgdrsacikamiekvvdrmyaeiddnrflevty
angdkevmyfkdfnsgamiqnvvdrakknaiksvletgqpglriqhlldsivdefaened
lpnttnpddwarisgkkgerivyirtlasraidt

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7ljfC (C:)
mgeserseafgiprdsplssgdaaeleqlrreaavlreqlenavgshaptrsardihqle
aridslaarnsklmetlkearqqllalreevdrlgqppsgygvllathdddtvdvftsgr
kmrltcspnidaaslkkgqtvrlnealtvveagtfeavgeistlreiladghralvvgha
deervvwladpliaedlpdglpealnddtrprklrpgdsllvdtkagyaferipkaeved
lvleevpdvsyadigglsrqieqirdavelpflhkelyreyslrppkgvllygppgcgkt
liakavanslakkmaevrgddaheaksyflnikgpellnkfvgeterhirlifqrareka
segtpvivffdemdsifrtrgtgvssdvettvvpqllseidgveglenvivigasnredm
idpailrpgrldvkikierpdaeaaqdiyskylteflpvhaddlaefdgdrsacikamie
kvvdrmyaeiddnrflevtyangdkevmyfkdfnsgamiqnvvdrakknaiksvletgqp
glriqhlldsivdefaenedlpnttnpddwarisgkkgerivyirtlvtgksssasraid
t

    Sequence, based on observed residues (ATOM records):
    >7ljfC (C:)
ppsgygvllathdddtvdvftsgrkmrltcspnidaaslkkgqtvrlnealtvveagtfe
avgeistlreiladghralvvghadeervvwladpliprklrpgdsllvdtkagyaferi
pkaevedlvleevpdvsyadigglsrqieqirdavelpflhkelyreyslrppkgvllyg
ppgcgktliakavanslakkmaksyflnikgpellngeterhirlifqrarekasegtpv
ivffdemdsifvvpqllseidgveglenvivigasnredmidpailrpgrldvkikierp
daeaaqdiyskylteflpvhaddlaefdgdrsacikamiekvvdrmyaeiddnrflevty
angdkevmyfkdfnsgamiqnvvdrakknaiksvletgqpglriqhlldsivdefaener
ivyirtl

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7ljfD (D:)
mgeserseafgiprdsplssgdaaeleqlrreaavlreqlenavgshaptrsardihqle
aridslaarnsklmetlkearqqllalreevdrlgqppsgygvllathdddtvdvftsgr
kmrltcspnidaaslkkgqtvrlnealtvveagtfeavgeistlreiladghralvvgha
deervvwladpliaedlpdglpealnddtrprklrpgdsllvdtkagyaferipkaeved
lvleevpdvsyadigglsrqieqirdavelpflhkelyreyslrppkgvllygppgcgkt
liakavanslakkmaevrgddaheaksyflnikgpellnkfvgeterhirlifqrareka
segtpvivffdemdsifrtrgtgvssdvettvvpqllseidgveglenvivigasnredm
idpailrpgrldvkikierpdaeaaqdiyskylteflpvhaddlaefdgdrsacikamie
kvvdrmyaeiddnrflevtyangdkevmyfkdfnsgamiqnvvdrakknaiksvletgqp
glriqhlldsivdefaenedlpnttnpddwarisgkkgerivyirtlvtgksssasraid
t

    Sequence, based on observed residues (ATOM records):
    >7ljfD (D:)
ppsgygvllathdddtvdvftsgrkmrltcspnidaaslkkgqtvrlnealtvveagtfe
avgeistlreiladghralvvghadeervvwladpliprklrpgdsllvdtkagyaferi
pka

  • Chain 'E':
    Sequence, based on SEQRES records:
    >7ljfE (E:)
mgeserseafgiprdsplssgdaaeleqlrreaavlreqlenavgshaptrsardihqle
aridslaarnsklmetlkearqqllalreevdrlgqppsgygvllathdddtvdvftsgr
kmrltcspnidaaslkkgqtvrlnealtvveagtfeavgeistlreiladghralvvgha
deervvwladpliaedlpdglpealnddtrprklrpgdsllvdtkagyaferipkaeved
lvleevpdvsyadigglsrqieqirdavelpflhkelyreyslrppkgvllygppgcgkt
liakavanslakkmaevrgddaheaksyflnikgpellnkfvgeterhirlifqrareka
segtpvivffdemdsifrtrgtgvssdvettvvpqllseidgveglenvivigasnredm
idpailrpgrldvkikierpdaeaaqdiyskylteflpvhaddlaefdgdrsacikamie
kvvdrmyaeiddnrflevtyangdkevmyfkdfnsgamiqnvvdrakknaiksvletgqp
glriqhlldsivdefaenedlpnttnpddwarisgkkgerivyirtlvtgksssasraid
t

    Sequence, based on observed residues (ATOM records):
    >7ljfE (E:)
ppsgygvllathdddtvdvftsgrkmrltcspnidaaslkkgqtvrlnealtvveagtfe
avgeistlreiladghralvvghadeervvwladpliprklrpgdsllvdtkagyaferi
pka

  • Chain 'F':
    Sequence, based on SEQRES records:
    >7ljfF (F:)
mgeserseafgiprdsplssgdaaeleqlrreaavlreqlenavgshaptrsardihqle
aridslaarnsklmetlkearqqllalreevdrlgqppsgygvllathdddtvdvftsgr
kmrltcspnidaaslkkgqtvrlnealtvveagtfeavgeistlreiladghralvvgha
deervvwladpliaedlpdglpealnddtrprklrpgdsllvdtkagyaferipkaeved
lvleevpdvsyadigglsrqieqirdavelpflhkelyreyslrppkgvllygppgcgkt
liakavanslakkmaevrgddaheaksyflnikgpellnkfvgeterhirlifqrareka
segtpvivffdemdsifrtrgtgvssdvettvvpqllseidgveglenvivigasnredm
idpailrpgrldvkikierpdaeaaqdiyskylteflpvhaddlaefdgdrsacikamie
kvvdrmyaeiddnrflevtyangdkevmyfkdfnsgamiqnvvdrakknaiksvletgqp
glriqhlldsivdefaenedlpnttnpddwarisgkkgerivyirtlvtgksssasraid
t

    Sequence, based on observed residues (ATOM records):
    >7ljfF (F:)
ppsgygvllathdddtvdvftsgrkmrltcspnidaaslkkgqtvrlnealtvveagtfe
avgeistlreiladghralvvghadeervvwladpliprklrpgdsllvdtkagyaferi
pkaevedlvleevpdvsyadigglsrqieqirdavelpflhkelyreyslrppkgvllyg
ppgcgktliakavanslakkmaksyflnikgpellngeterhirlifqrarekasegtpv
ivffdemdsifvvpqllseidgveglenvivigasnredmidpailrpgrldvkikierp
daeaaqdiyskylteflpvhaddlaefdgdrsacikamiekvvdrmyaeiddnrflevty
angdkevmyfkdfnsgamiqnvvdrakknaiksvletgqpglriqhlldsivdefaeeri
vyirtl