PDB entry 7l3o

View 7l3o on RCSB PDB site
Description: crystal structure of the rna binding domain of threonyl-trna synthetase from cryptosporidium parvum iowa ii
Deposited on 2020-12-18, released 2020-12-30
The last revision was dated 2020-12-30, with a file datestamp of 2020-12-25.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: threonyl-tRNA synthetase
    Species: Cryptosporidium parvum (strain Iowa II) [TaxId:353152]
    Gene: cgd7_1710
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: threonyl-tRNA synthetase
    Species: Cryptosporidium parvum (strain Iowa II) [TaxId:353152]
    Gene: cgd7_1710
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: threonyl-tRNA synthetase
    Species: Cryptosporidium parvum (strain Iowa II) [TaxId:353152]
    Gene: cgd7_1710
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: threonyl-tRNA synthetase
    Species: Cryptosporidium parvum (strain Iowa II) [TaxId:353152]
    Gene: cgd7_1710
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN, CA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7l3oA (A:)
mahhhhhhakkrdhrllgsnlqlfffdsnvspgscfwlpagarlynklmdfirneyrire
ftevitpnifscdlwktsghyfaykenmfifdveekewglkpmncpghcvmfkhmnpsyr
qlpirladfgvlhrnefsgalngltrvrrfqqddahifctpeqiqeevfkaldflffiyg
qlgftfdlflstmpkehlgteeqwkeaenalksaldktgrdwklnpgdgafygpkidiml
wdalkrqhqcgtiqldfqlpirfnlqyrtdeniseestnqeqppshqnadqnpdnslkqg
yrrpviihrailgsvermsavilehtggklpfwlsprqaivlsisektveyaksverelc
rrgfdvsgdysaatinkkiresqllqwnymlvigeneardkkvtlrcrdttipqelltld
qlilkfssmgfpssidsnssnq

    Sequence, based on observed residues (ATOM records):
    >7l3oA (A:)
rdhrllgsnlqlfffdsnvspgscfwlpagarlynklmdfirneyrireftevitpnifs
cdlwktsghyfaykenmfifdveekewglkpmncpghcvmfkhmnpsyrqlpirladfgv
lhrnefsgalngltrvrrfqqddahifctpeqiqeevfkaldflffiygqlgftfdlfls
tmpkehlgteeqwkeaenalksaldktgrdwklnpgdgafygpkidimlwdalkrqhqcg
tiqldfqlpirfnlqyrtdelkqgyrrpviihrailgsvermsavilehtggklpfwlsp
rqaivlsisektveyaksverelcrrgfdvsgdysaatinkkiresqllqwnymlvigen
eardkkvtlrcrdttipqelltldqlilkfssmgfpssid

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7l3oB (B:)
mahhhhhhakkrdhrllgsnlqlfffdsnvspgscfwlpagarlynklmdfirneyrire
ftevitpnifscdlwktsghyfaykenmfifdveekewglkpmncpghcvmfkhmnpsyr
qlpirladfgvlhrnefsgalngltrvrrfqqddahifctpeqiqeevfkaldflffiyg
qlgftfdlflstmpkehlgteeqwkeaenalksaldktgrdwklnpgdgafygpkidiml
wdalkrqhqcgtiqldfqlpirfnlqyrtdeniseestnqeqppshqnadqnpdnslkqg
yrrpviihrailgsvermsavilehtggklpfwlsprqaivlsisektveyaksverelc
rrgfdvsgdysaatinkkiresqllqwnymlvigeneardkkvtlrcrdttipqelltld
qlilkfssmgfpssidsnssnq

    Sequence, based on observed residues (ATOM records):
    >7l3oB (B:)
krdhrllgsnlqlfffdsnvspgscfwlpagarlynklmdfirneyrireftevitpnif
scdlwktsghyfaykenmfifdveekewglkpmncpghcvmfkhmnpsyrqlpirladfg
vlhrnefsgalngltrvrrfqqddahifctpeqiqeevfkaldflffiygqlgftfdlfl
stmpkehlgteeqwkeaenalksaldktgrdwklnpgdgafygpkidimlwdalkrqhqc
gtiqldfqlpirfnlqyrtdelkqgyrrpviihrailgsvermsavilehtggklpfwls
prqaivlsisektveyaksverelcrrgfdvsgdysaatinkkiresqllqwnymlvige
neardkkvtlrcrdttipqelltldqlilkfssmgfpssid

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7l3oC (C:)
mahhhhhhakkrdhrllgsnlqlfffdsnvspgscfwlpagarlynklmdfirneyrire
ftevitpnifscdlwktsghyfaykenmfifdveekewglkpmncpghcvmfkhmnpsyr
qlpirladfgvlhrnefsgalngltrvrrfqqddahifctpeqiqeevfkaldflffiyg
qlgftfdlflstmpkehlgteeqwkeaenalksaldktgrdwklnpgdgafygpkidiml
wdalkrqhqcgtiqldfqlpirfnlqyrtdeniseestnqeqppshqnadqnpdnslkqg
yrrpviihrailgsvermsavilehtggklpfwlsprqaivlsisektveyaksverelc
rrgfdvsgdysaatinkkiresqllqwnymlvigeneardkkvtlrcrdttipqelltld
qlilkfssmgfpssidsnssnq

    Sequence, based on observed residues (ATOM records):
    >7l3oC (C:)
krdhrllgsnlqlfffdsnvspgscfwlpagarlynklmdfirneyrireftevitpnif
scdlwktsghyfaykenmfifdveekewglkpmncpghcvmfkhmnpsyrqlpirladfg
vlhrnefsgalngltrvrrfqqddahifctpeqiqeevfkaldflffiygqlgftfdlfl
stmpkehlgteeqwkeaenalksaldktgrdwklnpgdgafygpkidimlwdalkrqhqc
gtiqldfqlpirfnlqyrtdelkqgyrrpviihrailgsvermsavilehtggklpfwls
prqaivlsisektveyaksverelcrrgfdvsgdysaatinkkiresqllqwnymlvige
neardkkvtlrcrdttipqelltldqlilkfssmgfpssid

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7l3oD (D:)
mahhhhhhakkrdhrllgsnlqlfffdsnvspgscfwlpagarlynklmdfirneyrire
ftevitpnifscdlwktsghyfaykenmfifdveekewglkpmncpghcvmfkhmnpsyr
qlpirladfgvlhrnefsgalngltrvrrfqqddahifctpeqiqeevfkaldflffiyg
qlgftfdlflstmpkehlgteeqwkeaenalksaldktgrdwklnpgdgafygpkidiml
wdalkrqhqcgtiqldfqlpirfnlqyrtdeniseestnqeqppshqnadqnpdnslkqg
yrrpviihrailgsvermsavilehtggklpfwlsprqaivlsisektveyaksverelc
rrgfdvsgdysaatinkkiresqllqwnymlvigeneardkkvtlrcrdttipqelltld
qlilkfssmgfpssidsnssnq

    Sequence, based on observed residues (ATOM records):
    >7l3oD (D:)
krdhrllgsnlqlfffdsnvspgscfwlpagarlynklmdfirneyrireftevitpnif
scdlwktsghyfaykenmfifdveekewglkpmncpghcvmfkhmnpsyrqlpirladfg
vlhrnefsgalngltrvrrfqqddahifctpeqiqeevfkaldflffiygqlgftfdlfl
stmpkehlgteeqwkeaenalksaldktgrdwklnpgdgafygpkidimlwdalkrqhqc
gtiqldfqlpirfnlqyrtdlkqgyrrpviihrailgsvermsavilehtggklpfwlsp
rqaivlsisektveyaksverelcrrgfdvsgdysaatinkkiresqllqwnymlvigen
eardkkvtlrcrdttipqelltldqlilkfssmgfpssid