PDB entry 7kzz

View 7kzz on RCSB PDB site
Description: cryo-em structure of yiip-fab complex in holo state
Deposited on 2020-12-10, released 2021-01-06
The last revision was dated 2021-07-28, with a file datestamp of 2021-07-23.
Experiment type: EM
Resolution: 3.42 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cadmium and zinc efflux pump FieF
    Species: Shewanella oneidensis [TaxId:70863]
    Gene: fieF, SO_4475
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Cadmium and zinc efflux pump FieF
    Species: Shewanella oneidensis [TaxId:70863]
    Gene: fieF, SO_4475
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Fab2R light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7KZZ (0-215)
  • Chain 'D':
    Compound: Fab2R heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7KZZ (0-237)
  • Chain 'E':
    Compound: Fab2R light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7KZZ (0-215)
  • Chain 'F':
    Compound: Fab2R heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7KZZ (0-237)
  • Heterogens: ZN

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7kzzA (A:)
mtqtsqydfwvklasrasvataltlitikllawlysgsasmlasltdsfadtlasiinfi
airyaivpadhdhryghgkaeplaalaqsafimgsaflllfyggerllnpspvenatlgv
vvsvvaivltlalvllqkralaatnstvveadslhyksdlflnaavllalvlsqygwwwa
dglfavliacyigqqafdlgyrsiqalldreldedtrqrikliakedprvlglhdlrtrq
agktvfiqfhleldgnlslneahsitdttglrvkaafedaeviihqdpvqvepttq

    Sequence, based on observed residues (ATOM records):
    >7kzzA (A:)
vklasrasvataltlitikllawlysgsasmlasltdsfadtlasiinfiairyaivpad
hdhryghgkaeplaalaqsafimgsaflllfyggerllnpspvenatlgvvvsvvaivlt
lalvllqkralaatnstvveadslhyksdlflnaavllalvlsqygwwwadglfavliac
yigqqafdlgyrsiqalldreldedtrqrikliakedprvlglhdlrtrqagktvfiqfh
leldgnlslneahsitdttglrvkaafedaeviihqdpvqv

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7kzzB (B:)
mtqtsqydfwvklasrasvataltlitikllawlysgsasmlasltdsfadtlasiinfi
airyaivpadhdhryghgkaeplaalaqsafimgsaflllfyggerllnpspvenatlgv
vvsvvaivltlalvllqkralaatnstvveadslhyksdlflnaavllalvlsqygwwwa
dglfavliacyigqqafdlgyrsiqalldreldedtrqrikliakedprvlglhdlrtrq
agktvfiqfhleldgnlslneahsitdttglrvkaafedaeviihqdpvqvepttq

    Sequence, based on observed residues (ATOM records):
    >7kzzB (B:)
vklasrasvataltlitikllawlysgsasmlasltdsfadtlasiinfiairyaivpad
hdhryghgkaeplaalaqsafimgsaflllfyggerllnpspvenatlgvvvsvvaivlt
lalvllqkralaatnstvveadslhyksdlflnaavllalvlsqygwwwadglfavliac
yigqqafdlgyrsiqalldreldedtrqrikliakedprvlglhdlrtrqagktvfiqfh
leldgnlslneahsitdttglrvkaafedaeviihqdpvqv

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7kzzC (C:)
sdiqmtqspsslsasvgdrvtitcrasqsvssavawyqqkpgkapklliysasslysgvp
srfsgsrsgtdftltisslqpedfatyycqqiwswplitfgqgtkveikrtvaapsvfif
ppsdsqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsst
ltlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records):
    >7kzzC (C:)
sdiqmtqspsslsasvgdrvtitcrasqsvssavawyqqkpgkapklliysasslysgvp
srfsgsrsgtdftltisslqpedfatyycqqiwswplitfgqgtkveikrtvaapsvfif
ppsdsqlksgtasvvcllnnfypreakvqnsqesvteqdskdstyslsstltlskadyek
hkvyacevthqg

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7kzzD (D:)
eisevqlvesggglvqpggslrlscaasgftiysssihwvrqapgkglewvasiysssgs
tyyadsvkgrftisadtskntaylqmnslraedtavyycarqsysglsprrhwsygamdy
wgqgtlvtvfnqikgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgv
htfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdktht

    Sequence, based on observed residues (ATOM records):
    >7kzzD (D:)
evqlvesggglvqpggslrlscaasgftiysssihwvrqapgkglewvasiysssgstyy
adsvkgrftisadtskntaylqmnslraedtavyycarqsysglsprrhwsygamdywgq
gtlvtvfnqikgpsvfplapalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgly
slssvvtvpyicnvnhkpsntkvdkkvep

  • Chain 'E':
    Sequence, based on SEQRES records:
    >7kzzE (E:)
sdiqmtqspsslsasvgdrvtitcrasqsvssavawyqqkpgkapklliysasslysgvp
srfsgsrsgtdftltisslqpedfatyycqqiwswplitfgqgtkveikrtvaapsvfif
ppsdsqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsst
ltlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records):
    >7kzzE (E:)
sdiqmtqspsslsasvgdrvtitcrasqsvssavawyqqkpgkapklliysasslysgvp
srfsgsrsgtdftltisslqpedfatyycqqiwswplitfgqgtkveikrtvaapsvfif
ppsdsqlksgtasvvcllnnfypreakvqnsqesvteqdskdstyslsstltlskadyek
hkvyacevthqg

  • Chain 'F':
    Sequence, based on SEQRES records:
    >7kzzF (F:)
eisevqlvesggglvqpggslrlscaasgftiysssihwvrqapgkglewvasiysssgs
tyyadsvkgrftisadtskntaylqmnslraedtavyycarqsysglsprrhwsygamdy
wgqgtlvtvfnqikgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgv
htfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdktht

    Sequence, based on observed residues (ATOM records):
    >7kzzF (F:)
evqlvesggglvqpggslrlscaasgftiysssihwvrqapgkglewvasiysssgstyy
adsvkgrftisadtskntaylqmnslraedtavyycarqsysglsprrhwsygamdywgq
gtlvtvfnqikgpsvfplapalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgly
slssvvtvpyicnvnhkpsntkvdkkvep