PDB entry 7ksr

View 7ksr on RCSB PDB site
Description: prc2:ezh1_a from a dimeric prc2 bound to a nucleosome
Deposited on 2020-11-24, released 2021-02-03
The last revision was dated 2021-02-24, with a file datestamp of 2021-02-19.
Experiment type: EM
Resolution: 4.1 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Histone-lysine N-methyltransferase EZH1
    Species: Homo sapiens [TaxId:9606]
    Gene: EZH1, KIAA0388
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Polycomb protein EED
    Species: Homo sapiens [TaxId:9606]
    Gene: EED
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Polycomb protein SUZ12
    Species: Homo sapiens [TaxId:9606]
    Gene: SUZ12, CHET9, JJAZ1, KIAA0160
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Histone-binding protein RBBP4
    Species: Homo sapiens [TaxId:9606]
    Gene: RBBP4, RBAP48
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7ksrA (A:)
    meipnpptskcitywkrkvkseymrlrqlkrlqanmgakalyvanfakvqektqilneew
    kklrvqpvqsmkpvsghpflkkctiesifpgfasqhmlmrslntvalvpimyswsplqqn
    fmvedetvlcnipymgdevkeedetfieelinnydgkvhgeeemipgsvlisdavflelv
    dalnqysdeeeeghndtsdgkqddskedlpvtrkrkrhaiegnkksskkqfpndmifsai
    asmfpengvpddmkeryreltemsdpnalppqctpnidgpnaksvqreqslhsfhtlfcr
    rcfkydcflhpfhatpnvykrknkeikiepepcgtdcflllegakeyamlhnprskcsgr
    rrrrhhivsascsnasasavaetkegdsdrdtgndwasssseansrcqtptkqkaspapp
    qlcvveapsepvewtgaeeslfrvfhgtyfnnfcsiarllgtktckqvfqfavkeslilk
    lptdelmnpsqkkkrkhrlwaahcrkiqlkkdnsstqvynyqpcdhpdrpcdstcpcimt
    qnfcekfcqcnpdcqnrfpgcrcktqcntkqcpcylavrecdpdlcltcgasehwdckvv
    sckncsiqrglkkhlllapsdvagwgtfikesvqknefiseycgelisqdeadrrgkvyd
    kymssflfnlnndfvvdatrkgnkirfanhsvnpncyakvvmvngdhrigifakraiqag
    eelffdyrysqadalkyvgieretdvl
    

    Sequence, based on observed residues (ATOM records):
    >7ksrA (A:)
    rlqanmgakalyvanfakvqektqilneewkklrvqpvqsmkplkkctiesifpgfasqh
    mlmrslntvalvpimyswsplqqnfmveqctpnidgpnaksvqreqslhsfhtlfcrrcf
    kydcflhpfhatpnvykrkvewtgaeeslfrvfhgtyfnnfcsiarllgtktckqvfqfa
    vkeslvynyqpcdhpdrpcdstcpcimtqnfcekfcqcnpdcqnrfpgcrcktqcntkqc
    pcylavrecdpdlcltcgasehwdckvvsckncsiqrglkkhlllapsdvagwgtfikes
    vqknefiseycgelisqdeadrrgkvydkymssflfnlnndfvvdatrkgnkirfanhsv
    npncyakvvmvngdhrigifakraiqageelffdy
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7ksrB (B:)
    mserevstapagtdmpaakkqklssdensnpdlsgdenddavsiesgtnterpdtptntp
    napgrkswgkgkwkskkckysfkcvnslkedhnqplfgvqfnwhskegdplvfatvgsnr
    vtlyechsqgeirllqsyvdadadenfytcawtydsntshpllavagsrgiiriinpitm
    qcikhyvghgnainelkfhprdpnlllsvskdhalrlwniqtdtlvaifggveghrdevl
    sadydllgekimscgmdhslklwrinskrmmnaikesydynpnktnrpfisqkihfpdfs
    trdihrnyvdcvrwlgdlilskscenaivcwkpgkmeddidkikpsesnvtilgrfdysq
    cdiwymrfsmdfwqkmlalgnqvgklyvwdlevedphkakcttlthhkcgaairqtsfsr
    dssiliavcddasiwrwdrlr
    

    Sequence, based on observed residues (ATOM records):
    >7ksrB (B:)
    kkckysfkcvnslkedhnqplfgvqfnwhskegdplvfatvgsnrvtlyechsqgeirll
    qsyvdadadenfytcawtydsntshpllavagsrgiiriinpitmqcikhyvghgnaine
    lkfhprdpnlllsvskdhalrlwniqtdtlvaifggveghrdevlsadydllgekimscg
    mdhslklwrinskrmmnaikesydynpnktnrpfisqkihfpdfstrdihrnyvdcvrwl
    gdlilskscenaivcwkpgkmeddidkikpsesnvtilgrfdysqcdiwymrfsmdfwqk
    mlalgnqvgklyvwdlevedphkakcttlthhkcgaairqtsfsrdssiliavcddasiw
    rwdrl
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7ksrC (C:)
    mapqkhgggggggsgpsagsggggfggsaavaaatasggksgggscggggsysasssssa
    aaaagaavlpvkkpkmehvqadhelflqafekptqiyrflrtrnliapiflhrtltymsh
    rnsrtnikrktfkvddmlskvekmkgeqeshslsahlqltftgffhkndkpspnseneqn
    svtlevllvkvchkkrkdvscpirqvptgkkqvplnpdlnqtkpgnfpslavssnefeps
    nshmvksysllfrvtrpgrrefngmingetnenidvneelparrkrnredgektfvaqmt
    vfdknrrlqlldgeyevamqemeecpiskkratwetildgkrlppfetfsqgptlqftlr
    wtgetndkstapiakplatrnseslhqenkpgsvkptqtiavkeslttdlqtrkekdtpn
    enrqklrifyqflynnntrqqtearddlhcpwctlncrklysllkhlklchsrfifnyvy
    hpkgaridvsinecydgsyagnpqdihrqpgfafsrngpvkrtpithilvcrpkrtkasm
    seflesedgeveqqrtyssghnrlyfhsdtclplrpqemevdsedekdpewlrektitqi
    eefsdvnegekevmklwnlhvmkhgfiadnqmnhacmlfvenygqkiikknlcrnfmlhl
    vsmhdfnlisimsidkavtklremqqklekgesaspaneeiteeqngtangfseinskek
    aletdsvsgvskqskkqkl
    

    Sequence, based on observed residues (ATOM records):
    >7ksrC (C:)
    hvqadhelflqafekptqiyrflrtrnliapiflhrtltymshrnsrtnikrktfkvddm
    lskvekmkgahlqltftgffhkvtlevllvkvchkkrkdvscpirqvptgkkqvplnsla
    vssnefepsnshmvksysllfrvtrfvaqmtvfdknrrlqlldgeyevamqemgptlqft
    lrwrifyqflynnntrqqtearddlhcpwctlncrklysllkhlklchsrfifnyvyhpa
    ridvsinecydgsyagpvkrtpithilvcrphnrlyfhsdtclplrpqemevdsedekdp
    ewlrektitqieefsdvnegekevmklwnlhvmkhgfiadnqmnhacmlfvenygqkiik
    knlcrnfmlhlvsmhdfnlisimsidkavtklremqq
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7ksrD (D:)
    madkeaafddaveervineeykiwkkntpflydlvmthalewpsltaqwlpdvtrpegkd
    fsihrlvlgthtsdeqnhlviasvqlpnddaqfdashydsekgefggfgsvsgkieieik
    inhegevnrarympqnpciiatktpssdvlvfdytkhpskpdpsgecnpdlrlrghqkeg
    yglswnpnlsghllsasddhticlwdisavpkegkvvdaktiftghtavvedvswhllhe
    slfgsvaddqklmiwdtrsnntskpshsvdahtaevnclsfnpysefilatgsadktval
    wdlrnlklklhsfeshkdeifqvqwsphnetilassgtdrrlnvwdlskigeeqspedae
    dgppellfihgghtakisdfswnpnepwvicsvsednimqvwqmaeniyndedpegsvdp
    egqgs
    

    Sequence, based on observed residues (ATOM records):
    >7ksrD (D:)
    aveervineeykiwkkntpflydlvmthalewpsltaqwlpdvtrpdfsihrlvlgthts
    deqnhlviasvqlpnddavsgkieieikinhegevnrarympqnpciiatktpssdvlvf
    dytkhpdlrlrghqkegyglswnpnlsghllsasddhticlwdisavpkegkvvdaktif
    tghtavvedvswhllheslfgsvaddqklmiwdtrsnntskpshsvdahtaevnclsfnp
    ysefilatgsadktvalwdlrnlklklhsfeshkdeifqvqwsphnetilassgtdrrln
    vwdlskigeeqspedaedgppellfihgghtakisdfswnpnepwvicsvsednimqvwq
    maeniyn