PDB entry 7kqh

View 7kqh on RCSB PDB site
Description: antibodies that engage the hemagglutinin receptor-binding site of influenza b viruses
Deposited on 2020-11-16, released 2020-12-16
The last revision was dated 2021-01-20, with a file datestamp of 2021-01-15.
Experiment type: XRAY
Resolution: 3.5 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemagglutinin
    Species: Influenza B virus [TaxId:11520]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Hemagglutinin
    Species: Influenza B virus [TaxId:11520]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: 2365 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7KQH
  • Chain 'D':
    Compound: 2365 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7KQH (Start-215)
  • Chain 'H':
    Compound: 2365 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7KQH
  • Chain 'L':
    Compound: 2365 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7KQH (Start-215)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7kqhA (A:)
pltttptksyfanlkgtrtrgklcpdclnctdldvalgrpmcvgttpsakasilhevrpv
tsgcfpimhdrtkirqlpnllrgyekirlstqnvidaekapggpyrlgtsgscpnatski
gffatmawavpkdnyknatnpltvevpyictegedqitvwgfhsdnkiqmkslygdsnpq
kftssangvtthyvsqigdfpdqtedgglpqsgrivvdymmqkpgktgtivyqrgvllpq
kvwcasgrskvikgslpligeadclheeygglnkskpyytgkhakaigncpiwvktplk

    Sequence, based on observed residues (ATOM records):
    >7kqhA (A:)
gtrtrgklcpdclnctdldvalgrpmcvgttpsakasilhevrpvtsgcfpimhdrtkir
qlpnllrgyekirlstqnvidaekapggpyrlgtsgscpnatskigffatmawavpkdny
knatnpltvevpyictegedqitvwgfhsdnkiqmkslygdsnpqkftssangvtthyvs
qigdfpdqtedgglpqsgrivvdymmqkpgktgtivyqrgvllpqkvwcasgrskvi

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7kqhB (B:)
pltttptksyfanlkgtrtrgklcpdclnctdldvalgrpmcvgttpsakasilhevrpv
tsgcfpimhdrtkirqlpnllrgyekirlstqnvidaekapggpyrlgtsgscpnatski
gffatmawavpkdnyknatnpltvevpyictegedqitvwgfhsdnkiqmkslygdsnpq
kftssangvtthyvsqigdfpdqtedgglpqsgrivvdymmqkpgktgtivyqrgvllpq
kvwcasgrskvikgslpligeadclheeygglnkskpyytgkhakaigncpiwvktplk

    Sequence, based on observed residues (ATOM records):
    >7kqhB (B:)
gtrtrgklcpdclnctdldvalgrpmcvgttpsakasilhevrpvtsgcfpimhdrtkir
qlpnllrgyekirlstqnvidaekapggpyrlgtsgscpnatskigffatmawavpkdny
knatnpltvevpyictegedqitvwgfhsdnkiqmkslygdsnpqkftssangvtthyvs
qigdfpdqtedgglpqsgrivvdymmqkpgktgtivyqrgvllpqkvwcasgrskvi

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7kqhC (C:)
asevqlvesggglvqpgrslrlscaasgftfddypmhwvrqvpgkglewvssinwnggst
dhadsvkgrftisrdnarnslylemnslksedtalyycakdlrasssmdyyyysgmdvwg
qgtmvtvsgastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvh
tfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepkscdkhhhhhh

    Sequence, based on observed residues (ATOM records):
    >7kqhC (C:)
evqlvesggglvqpgrslrlscaasgftfddypmhwvrqvpgkglewvssinwnggstdh
adsvkgrftisrdnarnslylemnslksedtalyycakdlrasssmdyyyysgmdvwgqg
tmvtvgastkgpsvfpltaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglys
lssvvtvpssslgtqtyicnvnhkpsntkvdkrv

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7kqhD (D:)
asdiqmtqspsslsasvgdrvtitcqasqginnylnwyqqkpgkapkvliydasnlqtgv
psrfsgsgsgtdfiftisslkpedvatyycqqyenvpitfgqgtrldikrtvaapsvfif
ppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsst
ltlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records):
    >7kqhD (D:)
diqmtqspsslsasvgdrvtitcqasqginnylnwyqqkpgkapkvliydasnlqtgvps
rfsgsgsgtdfiftisslkpedvatyycqqyenvpitfgqgtrldikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevtvtksfnrgec

  • Chain 'H':
    Sequence, based on SEQRES records:
    >7kqhH (H:)
asevqlvesggglvqpgrslrlscaasgftfddypmhwvrqvpgkglewvssinwnggst
dhadsvkgrftisrdnarnslylemnslksedtalyycakdlrasssmdyyyysgmdvwg
qgtmvtvsgastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvh
tfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepkscdkhhhhhh

    Sequence, based on observed residues (ATOM records):
    >7kqhH (H:)
evqlvesggglvqpgrslrlscaasgftfddypmhwvrqvpgkglewvssinwnggstdh
adsvkgrftisrdnarnslylemnslksedtalyycakdlrasssmdyyyysgmdvwgqg
tmvtvsgastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtf
pavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrv

  • Chain 'L':
    Sequence, based on SEQRES records:
    >7kqhL (L:)
asdiqmtqspsslsasvgdrvtitcqasqginnylnwyqqkpgkapkvliydasnlqtgv
psrfsgsgsgtdfiftisslkpedvatyycqqyenvpitfgqgtrldikrtvaapsvfif
ppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsst
ltlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records):
    >7kqhL (L:)
sdiqmtqspsslsasvgdrvtitcqasqginnylnwyqqkpgkapkvliydasnlqtgvp
srfsgsgsgtdfiftisslkpedvatyycqqyenvpitfgqgtrldikrtvaapsvfifp
psdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyekhkvyacevthqglsspvtksfnrgec