PDB entry 7kp0

View 7kp0 on RCSB PDB site
Description: CD1a-42:1 SM binary complex
Class: immune system
Keywords: CD1, antigen presentation, lipid, IMMUNE SYSTEM
Deposited on 2020-11-10, released 2021-05-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-06-16, with a file datestamp of 2021-06-11.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: T-cell surface glycoprotein CD1a
    Species: Homo sapiens [TaxId:9606]
    Gene: CD1A
    Database cross-references and differences (RAF-indexed):
    • Uniprot P06126 (Start-277)
      • conflict (12)
      • conflict (50)
      • expression tag (278-284)
    Domains in SCOPe 2.08: d7kp0a1, d7kp0a2, d7kp0a3
  • Chain 'B':
    Compound: Beta-2-microglobulin
    Species: Homo sapiens [TaxId:9606]
    Gene: B2M, CDABP0092, HDCMA22P
    Database cross-references and differences (RAF-indexed):
    • Uniprot P61769 (Start-99)
      • expression tag (100-104)
    Domains in SCOPe 2.08: d7kp0b1, d7kp0b2
  • Heterogens: WUA, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >7kp0A (A:)
atglkeplsfhviwiasfynhswkqnlvsgwlsdlqthtwdsnsstivflwpwsrgnfsn
eewkeletlfrirtirsfegirryahelqfeypfeiqvtggcelhsgkvsgsflqlayqg
sdfvsfqnnswlpypvagnmakhfckvlnqnqhendithnllsdtcprfilglldagkah
lqrqvkpeawlshgpspgpghlqlvchvsgfypkpvwvmwmrgeqeqqgtqrgdilpsad
gtwylratlevaageaadlscrvkhsslegqdivlywegslvprg

    Sequence, based on observed residues (ATOM records): (download) 
    >7kp0A (A:)
lsfhviwiasfynhswkqnlvsgwlsdlqthtwdsnsstivflwpwsrgnfsneewkele
tlfrirtirsfegirryahelqfeypfeiqvtggcelhsgsflqlayqgsdfvsfqnnsw
lpypvagnmakhfckvlnqnqhendithnllsdtcprfilglldagkahlqrqvkpeawl
shgpspgpghlqlvchvsgfypkpvwvmwmrgeqeqqgtqrgdilpsadgtwylratlev
aageaadlscrvkhsslegqdivlywegslvprg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >7kp0B (B:)
aiqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdmgslvpr

    Sequence, based on observed residues (ATOM records): (download) 
    >7kp0B (B:)
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdmgslvp