PDB entry 7kem

View 7kem on RCSB PDB site
Description: Crystallographic structure of L,D-transpeptidase 2 from Mycobacterium tuberculosis
Class: transferase
Keywords: Transpeptidase, Peptidoglycan synthesis, TRANSFERASE
Deposited on 2020-10-11, released 2020-11-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-11-18, with a file datestamp of 2020-11-13.
Experiment type: XRAY
Resolution: 1.77 Å
R-factor: N/A
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: L,D-transpeptidase 2
    Species: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) [TaxId:83332]
    Gene: ldtB, lppS, Rv2518c, RVBD_2518c, P425_02624
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7kema1, d7kema2
  • Chain 'B':
    Compound: L,D-transpeptidase 2
    Species: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) [TaxId:83332]
    Gene: ldtB, lppS, Rv2518c, RVBD_2518c, P425_02624
    Database cross-references and differences (RAF-indexed):
  • Heterogens: 0JC, DGL, 6CL, PT

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >7kemA (A:)
mpkvgiaaqagrtrvrrawltalmmtavmigavacgsgrgpapikviadkgtpfadllvp
kltasvtdgavgvtvdapvsvtaadgvlaavtmvndngrpvagrlspdglrwstteqlgy
nrrytlnatalglggaatrqltfqtsspahltmpyvmpgdgevvgvgepvairfdeniad
rgaaekaikittnppvegafywlnnrevrwrpehfwkpgtavdvavntygvdlgegmfge
dnvqthftigdeviataddntkiltvrvngevvksmptsmgkdstptangiyivgsrykh
iimdsstygvpvnspngyrtdvdwatqisysgvfvhsapwsvgaqghtntshgclnvsps
naqwfydhvkrgdivevvntvggtlpgidglgdwnipwdqwragnaka

    Sequence, based on observed residues (ATOM records): (download) 
    >7kemA (A:)
hltmpyvmpgdgevvgvgepvairfdeniadrgaaekaikittnppvegafywlnnrevr
wrpehfwkpgtavdvavntygvdlgegmfgednvqthftigdeviataddntkiltvrvn
gevvksmptsmgkdstptangiyivgsrykhiimdsstygvpvnspngyrtdvdwatqis
ysgvfvhsapwsvgaqghtntshgclnvspsnaqwfydhvkrgdivevvntvggtlpgid
glgdwnipwdqwragnak

  • Chain 'B':
    No sequence available.