PDB entry 7kej

View 7kej on RCSB PDB site
Description: bdbv-289 bound to ebov gpdmuc makona
Deposited on 2020-10-11, released 2021-06-23
The last revision was dated 2021-06-23, with a file datestamp of 2021-06-18.
Experiment type: EM
Resolution: 3.8 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Virion spike glycoprotein
    Species: Ebola virus [TaxId:1570291]
    Gene: GP
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Virion spike glycoprotein
    Species: Ebola virus [TaxId:1570291]
    Gene: GP
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Virion spike glycoprotein
    Species: Ebola virus [TaxId:1570291]
    Gene: GP
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Virion spike glycoprotein
    Species: Zaire ebolavirus [TaxId:186538]
    Gene: GP
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Virion spike glycoprotein
    Species: Zaire ebolavirus [TaxId:186538]
    Gene: GP
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Virion spike glycoprotein
    Species: Zaire ebolavirus [TaxId:186538]
    Gene: GP
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Antibody Fab heavy chain (HC) BDBV-289
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7KEJ
  • Chain 'H':
    Compound: Antibody Fab heavy chain (HC) BDBV-289
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7KEJ
  • Chain 'I':
    Compound: Antibody Fab heavy chain (HC) BDBV-289
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7KEJ
  • Chain 'J':
    Compound: Antibody Fab light chain (LC) BDBV-289
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7KEJ
  • Chain 'K':
    Compound: Antibody Fab light chain (LC) BDBV-289
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7KEJ
  • Chain 'L':
    Compound: Antibody Fab light chain (LC) BDBV-289
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7KEJ
  • Heterogens: NAG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7kejA (A:)
mdamkrglccvlllcgavfvspsqeiharfrrgarsiplgvihnstlqvsdvdklvcrdk
lsstnqlrsvglnlegngvatdvpsvtkrwgfrsgvppkvvnyeagewaencynleikkp
dgseclpaapdgirgfprcryvhkvsgtgpcagdfafhkegafflydrlastviyrgttf
aegvvaflilpqakkdffsshplrepvnatedpssgyysttiryqatgfgtneteylfev
dnltyvqlesrftpqfllqlnetiyasgkrsnttgkliwkvnpeidttigewafwetkkn
ltrkirseelsft

    Sequence, based on observed residues (ATOM records):
    >7kejA (A:)
siplgvihnstlqvsdvdklvcrdklsstnqlrsvglnlegngvatdvpsvtkrwgfrsg
vppkvvnyeagewaencynleikkpdgseclpaapdgirgfprcryvhkvsgtgpcagdf
afhkegafflydrlastviyrgttfaegvvaflilyysttiryqatgfgtneteylfevd
nltyvqlesrftpqfllqlnetiyasgkrsnttgkliwkvnpeidttigewafwe

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7kejB (B:)
mdamkrglccvlllcgavfvspsqeiharfrrgarsiplgvihnstlqvsdvdklvcrdk
lsstnqlrsvglnlegngvatdvpsvtkrwgfrsgvppkvvnyeagewaencynleikkp
dgseclpaapdgirgfprcryvhkvsgtgpcagdfafhkegafflydrlastviyrgttf
aegvvaflilpqakkdffsshplrepvnatedpssgyysttiryqatgfgtneteylfev
dnltyvqlesrftpqfllqlnetiyasgkrsnttgkliwkvnpeidttigewafwetkkn
ltrkirseelsft

    Sequence, based on observed residues (ATOM records):
    >7kejB (B:)
siplgvihnstlqvsdvdklvcrdklsstnqlrsvglnlegngvatdvpsvtkrwgfrsg
vppkvvnyeagewaencynleikkpdgseclpaapdgirgfprcryvhkvsgtgpcagdf
afhkegafflydrlastviyrgttfaegvvaflilyysttiryqatgfgtneteylfevd
nltyvqlesrftpqfllqlnetiyasgkrsnttgkliwkvnpeidttigewafwe

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7kejC (C:)
mdamkrglccvlllcgavfvspsqeiharfrrgarsiplgvihnstlqvsdvdklvcrdk
lsstnqlrsvglnlegngvatdvpsvtkrwgfrsgvppkvvnyeagewaencynleikkp
dgseclpaapdgirgfprcryvhkvsgtgpcagdfafhkegafflydrlastviyrgttf
aegvvaflilpqakkdffsshplrepvnatedpssgyysttiryqatgfgtneteylfev
dnltyvqlesrftpqfllqlnetiyasgkrsnttgkliwkvnpeidttigewafwetkkn
ltrkirseelsft

    Sequence, based on observed residues (ATOM records):
    >7kejC (C:)
siplgvihnstlqvsdvdklvcrdklsstnqlrsvglnlegngvatdvpsvtkrwgfrsg
vppkvvnyeagewaencynleikkpdgseclpaapdgirgfprcryvhkvsgtgpcagdf
afhkegafflydrlastviyrgttfaegvvaflilyysttiryqatgfgtneteylfevd
nltyvqlesrftpqfllqlnetiyasgkrsnttgkliwkvnpeidttigewafwe

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7kejD (D:)
nnnthhqdtgeesassgklglitntiagvaglitggrrtrrevivnaqpkcnpnlhywtt
qdegaaiglawipyfgpaaegiyteglmhnqdglicglrqlanettqalqlflrattelr
tfsilnrkaidfllqrwggtchilgpdcciephdwtknitdkidqiihddddkagwshpq
fekgggsgggsgggswshpqfek

    Sequence, based on observed residues (ATOM records):
    >7kejD (D:)
vivnaqpkcnpnlhywttqaiglawipyfgpaaegiyteglmhnqdglicglrqlanett
qalqlflrattelrtfsilnrkaidfllqrwggtchilgpdcciep

  • Chain 'E':
    Sequence, based on SEQRES records:
    >7kejE (E:)
nnnthhqdtgeesassgklglitntiagvaglitggrrtrrevivnaqpkcnpnlhywtt
qdegaaiglawipyfgpaaegiyteglmhnqdglicglrqlanettqalqlflrattelr
tfsilnrkaidfllqrwggtchilgpdcciephdwtknitdkidqiihddddkagwshpq
fekgggsgggsgggswshpqfek

    Sequence, based on observed residues (ATOM records):
    >7kejE (E:)
vivnaqpkcnpnlhywttqaiglawipyfgpaaegiyteglmhnqdglicglrqlanett
qalqlflrattelrtfsilnrkaidfllqrwggtchilgpdcciep

  • Chain 'F':
    Sequence, based on SEQRES records:
    >7kejF (F:)
nnnthhqdtgeesassgklglitntiagvaglitggrrtrrevivnaqpkcnpnlhywtt
qdegaaiglawipyfgpaaegiyteglmhnqdglicglrqlanettqalqlflrattelr
tfsilnrkaidfllqrwggtchilgpdcciephdwtknitdkidqiihddddkagwshpq
fekgggsgggsgggswshpqfek

    Sequence, based on observed residues (ATOM records):
    >7kejF (F:)
vivnaqpkcnpnlhywttqaiglawipyfgpaaegiyteglmhnqdglicglrqlanett
qalqlflrattelrtfsilnrkaidfllqrwggtchilgpdcciep

  • Chain 'G':
    Sequence, based on SEQRES records:
    >7kejG (G:)
melglrwvflvailegvqcqvqlvqsgaevkkpgssvkvsckasgatfgsdtvtwvrqap
gqglewmggiipffgeanyaqrfqgrvtitadkstntaymelsslrsedtavyfcarqin
ematfgeihyytymdvwgqgtlvtvssastkgpsvfplapsskstsggtaalgclvkdyf
pepvtvswnsgaltsgvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntk
vdkrvepkscd

    Sequence, based on observed residues (ATOM records):
    >7kejG (G:)
vqlvqsgaevkkpgssvkvsckasgatfgsdtvtwvrqapgqglewmggiipffgeanya
qrfqgrvtitadkstntaymelsslrsedtavyfcarqinematfgeihyytymdvwgqg
tlvtvssas

  • Chain 'H':
    Sequence, based on SEQRES records:
    >7kejH (H:)
melglrwvflvailegvqcqvqlvqsgaevkkpgssvkvsckasgatfgsdtvtwvrqap
gqglewmggiipffgeanyaqrfqgrvtitadkstntaymelsslrsedtavyfcarqin
ematfgeihyytymdvwgqgtlvtvssastkgpsvfplapsskstsggtaalgclvkdyf
pepvtvswnsgaltsgvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntk
vdkrvepkscd

    Sequence, based on observed residues (ATOM records):
    >7kejH (H:)
vqlvqsgaevkkpgssvkvsckasgatfgsdtvtwvrqapgqglewmggiipffgeanya
qrfqgrvtitadkstntaymelsslrsedtavyfcarqinematfgeihyytymdvwgqg
tlvtvssas

  • Chain 'I':
    Sequence, based on SEQRES records:
    >7kejI (I:)
melglrwvflvailegvqcqvqlvqsgaevkkpgssvkvsckasgatfgsdtvtwvrqap
gqglewmggiipffgeanyaqrfqgrvtitadkstntaymelsslrsedtavyfcarqin
ematfgeihyytymdvwgqgtlvtvssastkgpsvfplapsskstsggtaalgclvkdyf
pepvtvswnsgaltsgvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntk
vdkrvepkscd

    Sequence, based on observed residues (ATOM records):
    >7kejI (I:)
vqlvqsgaevkkpgssvkvsckasgatfgsdtvtwvrqapgqglewmggiipffgeanya
qrfqgrvtitadkstntaymelsslrsedtavyfcarqinematfgeihyytymdvwgqg
tlvtvssas

  • Chain 'J':
    Sequence, based on SEQRES records:
    >7kejJ (J:)
mgwsciilflvatatgvhgseltqdpavsvalgqtvritcqgdslrnyyaswyqqkprqa
pvlvfygknnrpsgipdrfsgsssgntasltisgaqaedeadyycnsrdsssnhlvfggg
tkltvlsqpkaapsvtlfppsseelqankatlvclisdfypgavtvawkadsspvkagve
tttpskqsnnkyaassylsltpeqwkshrsyscqvthegstvektvaptec

    Sequence, based on observed residues (ATOM records):
    >7kejJ (J:)
gseltqdpavsvalgqtvritcqgdslrnyyaswyqqkprqapvlvfygknnrpsgipdr
fsgsssgntasltisgaqaedeadyycnsrdsssnhlvfgggtkltvlsq

  • Chain 'K':
    Sequence, based on SEQRES records:
    >7kejK (K:)
mgwsciilflvatatgvhgseltqdpavsvalgqtvritcqgdslrnyyaswyqqkprqa
pvlvfygknnrpsgipdrfsgsssgntasltisgaqaedeadyycnsrdsssnhlvfggg
tkltvlsqpkaapsvtlfppsseelqankatlvclisdfypgavtvawkadsspvkagve
tttpskqsnnkyaassylsltpeqwkshrsyscqvthegstvektvaptec

    Sequence, based on observed residues (ATOM records):
    >7kejK (K:)
gseltqdpavsvalgqtvritcqgdslrnyyaswyqqkprqapvlvfygknnrpsgipdr
fsgsssgntasltisgaqaedeadyycnsrdsssnhlvfgggtkltvlsq

  • Chain 'L':
    Sequence, based on SEQRES records:
    >7kejL (L:)
mgwsciilflvatatgvhgseltqdpavsvalgqtvritcqgdslrnyyaswyqqkprqa
pvlvfygknnrpsgipdrfsgsssgntasltisgaqaedeadyycnsrdsssnhlvfggg
tkltvlsqpkaapsvtlfppsseelqankatlvclisdfypgavtvawkadsspvkagve
tttpskqsnnkyaassylsltpeqwkshrsyscqvthegstvektvaptec

    Sequence, based on observed residues (ATOM records):
    >7kejL (L:)
gseltqdpavsvalgqtvritcqgdslrnyyaswyqqkprqapvlvfygknnrpsgipdr
fsgsssgntasltisgaqaedeadyycnsrdsssnhlvfgggtkltvlsq