PDB entry 7k9m

View 7k9m on RCSB PDB site
Description: crystal structure of the complex of m. tuberculosis phers with cognate precursor trna and 5'-o-(n-phenylalanyl)sulfamoyl-adenosine
Deposited on 2020-09-29, released 2021-05-12
The last revision was dated 2021-06-16, with a file datestamp of 2021-06-11.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phenylalanine--tRNA ligase alpha subunit
    Species: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) [TaxId:83332]
    Gene: pheS, Rv1649, MTCY06H11.14
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Phenylalanine--tRNA ligase beta subunit
    Species: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) [TaxId:83332]
    Gene: pheT, Rv1650, MTCY06H11.15
    Database cross-references and differences (RAF-indexed):
    • Uniprot P9WFU1 (4-834)
      • expression tag (0-3)
  • Chain 'C':
    Compound: tRNA(phe)
    Species: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv), synthetic [TaxId:83332]
  • Heterogens: W5Y, MG, GOL, P6G, PGE, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7k9mA (A:)
mlspealttavdaaqqaialadtldvlarvktehlgdrsplalarqalavlpkeqraeag
krvnaarnaaqrsyderlatlraerdaavlvaegidvtlpstrvpagarhpiimlaehva
dtfiamgwelaegpeveteqfnfdalnfpadhpargeqdtfyiapedsrqllrthtspvq
irtllarelpvyiisigrtfrtdeldathtpifhqveglavdrglsmahlrgtldafara
efgpsartrirphffpftepsaevdvwfankiggaawvewggcgmvhpnvlratgidpdl
ysgfafgmglertlqfrngipdmrdmvegdvrfslpfgvga

    Sequence, based on observed residues (ATOM records):
    >7k9mA (A:)
spealttavdaaqqaialadtldvlarvktehlgdrsplalarqalavlpkeqraeagkr
vnaarnaaqrsyderlatlraerdaavlvaegidvtlpstrvpagarhpiimlaehvadt
fiamgwelaegpeveteqfnfdalnfpadhpargeqdtfyiapedsrqllrthtspvqir
tllarelpvyiisigrtfrtdeldathtpifhqveglavdrglsmahlrgtldafaraef
gpsartrirphffpftepsaevdvwfankiggaawvewggcgmvhpnvlratgidpdlys
gfafgmglertlqfrngipdmrdmvegdvrfslpfgvga

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7k9mB (B:)
qsnamrlpyswlrevvavgasgwdvtpgeleqtllrigheveeviplgpvdgpvtvgrva
dieeltgykkpiracavdigdrqyreiicgatnfavgdlvvvalpgatlpggftisarka
ygrnsdgmicsaaelnlgadhsgilvlppgaaepgadgagvlglddvvfhlaitpdrgyc
msvrglarelacaydldfvdpasnsrvpplpiegpawpltvqpetgvrrfalrpvigidp
aavspwwlqrrlllcgiratcpavdvtnyvmlelghpmhahdrnrisgtlgvrfarsget
avtldgierkldtadvlivddaataaiggvmgaastevradstdvlleaaiwdpaavsrt
qrrlhlpseaarryertvdpaisvaaldrcarlladiaggevsptltdwrgdppcddwsp
ppirmgvdvpdriagvaypqgttarrlaqigavvthdgdtltvtppswrpdlrqpadlve
evlrleglevipsvlppapagrgltagqqrrrtigrslalsgyveilptpflpagvfdlw
gleaddsrrmttrvlnpleadrpqlattllpallealvrnvsrglvdvalfaiaqvvqpt
eqtrgvglipvdrrptddeiamldaslprqpqhvaavlaglreprgpwgpgrpveaadaf
eavriiarasrvdvtlrpaqylpwhpgrcaqvfvgessvghagqlhpaviersglpkgtc
avelnldaipcsaplpaprvspypavfqdvslvvaadipaqavadavragagdlledial
fdvftgpqigehrksltfalrfrapdrtlteddasaardaavqsaaervgavlrg

    Sequence, based on observed residues (ATOM records):
    >7k9mB (B:)
qsnamrlpyswlrevvavgasgwdvtpgeleqtllrigheveeviplgpvdgpvtvgrva
dieeltgykkpiracavdigdrqyreiicgatnfavgdlvvvalpgatlpggftisarka
ygrnsdgmicsaaelnlgadhsgilvlppgaaepgadgagvlglddvvfhlaitpdrgyc
msvrglarelacaydldfvdpasnsrpplpiegpawpltvqpetgvrrfalrpvigidpa
avspwwlqrrlllcgiratcpavdvtnyvmlelghpmhahdrnrisgtlgvrfarsgeta
vtldgierkldtadvlivddaataaiggvmgaastevradstdvlleaaiwdpaavsrtq
rrlhlpseaarryertvdpaisvaaldrcarlladiaggevsptltdwrgdppcddwspp
pirmgvdvpdriagvaypqgttarrlaqigavvthdgdtltvtppswrpdlrqpadlvee
vlrleglevipsvlppapagrgltagqqrrrtigrslalsgyveilptpflpagvfdlwg
leaddsrrmttrvlnpleadrpqlattllpallealvrnvsrglvdvalfaiaqvvqpte
qtrgvglipvdrrptddeiamldaslprqpqhvaavlaglreprgpwgpgrpveaadafe
avriiarasrvdvtlrpaqylpwhpgrcaqvfvgessvghagqlhpaviersglpkgtca
velnldaipcsaplpaprvspypavfqdvslvvaadipaqavadavragagdlledialf
dvftgpqigehrksltfalrfrapdrtlteddasaardaavqsaaervgavlrg

  • Chain 'C':
    No sequence available.